FMO01931.5prime Sequence
1028 bp (1028 high quality bases) assembled on 2008-04-28
> FMO01931.5prime
CAGTCGACATGTTAAGAAAATTAACAAAACTATCGACCTTAAAGGTCAAA
TGTGAACTCCGCGCCCTATCCTCACTCACCCAAACATCGCAACATATATT
TGACCGCAATGCCAAGAGATTACAGAAGGAAAGGGCCGCACTCAGCGAAG
ACGTTGGACTATACGATTACTTGAAGGAGGAGATCGGCTTCCGCCTGGCT
GACAGAGTATTCGACATTAAGCGGGAGTTCAAGGCGGCGGCGGATATCGG
ATGCAGTCGCGGCTATCTGTCCAGACACATTCTGGCGGAGAGTGTGGAGC
AGCTGACGCTCACGGACACCAGTGCTACGATGCTGGAGCAGGCACAGGGC
ACTCCGGGTCTGAAAATGGTGAAACTAGTTAAGGACGAAGAGCAGCTGGA
TTTTGAGGACAATTCACTGGATCTGGTCATCTCTAGCCTAAGTCTGCACT
GGGTGAATGATCTGCCGGGCTGCTTTGTCAGAATTAAGCAGAGTCTGAAA
CCGGATGGGGTCTTTATAGCCTCCATGTTTGGTGGAGACACCCTCTACGA
GCTGCGCTCCTCGCTCCAATTGGCCGAGCTGGAGCGCAAAGGTGGCATAT
CTCCGCACATCTCGCCCTTCACTCAGATTAGGGATATTGGTTCCCTGCTT
AATCGCGCCGGCTTCACCATGCTGACAATAGACACCGATGAACTGGTCAT
CGGCTATCCCAGCATGTTCGAACTGATGTGGGATCTCAAGGGTATGGCAG
AGAACAATGCTGCATTCAATCGACCCGCTCATCTTAGTCGAGAAACGATG
CTCGCGGCCAGTGCCATCTACCAGGAGCTGTATGCAAAGCCCAACGAGAA
GGGGATACCTGCAACCTTCCAAATCATCTACTTTGTGGGCTGGAAACCCG
GTCCCAATCAGCACAGCCTCTGGAAAGAGGAACGGTGAGTGTCGCTCATG
ATCTAGGTTCGATTATCGAAAGGCGCAAGCTGGACACAAAGCGGGAGATG
CAAGCTTTCTAGACATTCGTTGGCCGCG
FMO01931.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8067-RB | 1321 | CG8067-RB | 233..1231 | 9..999 | 4775 | 99 | Plus |
| CG8067-RA | 1146 | CG8067-RA | 58..1056 | 9..999 | 4775 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13984198..13984771 | 402..971 | 2640 | 99 | Plus |
| 2R | 25286936 | 2R | 13983882..13984140 | 143..401 | 1295 | 100 | Plus |
| 2R | 25286936 | 2R | 13983687..13983823 | 9..145 | 685 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:51:21 has no hits.
FMO01931.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:37 Download gff for
FMO01931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8067-RA | 26..1040 | 1..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:40 Download gff for
FMO01931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8067-RA | 48..1062 | 1..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:02 Download gff for
FMO01931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8067-RA | 48..1062 | 1..1007 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:02 Download gff for
FMO01931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13983677..13983823 | 1..145 | 97 | -> | Plus |
| 2R | 13983885..13984140 | 146..401 | 100 | -> | Plus |
| 2R | 13984198..13984809 | 402..1007 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:40 Download gff for
FMO01931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9871182..9871328 | 1..145 | 97 | -> | Plus |
| arm_2R | 9871390..9871645 | 146..401 | 100 | -> | Plus |
| arm_2R | 9871703..9872314 | 402..1007 | 97 | | Plus |
