FMO01932.5prime Sequence
668 bp (668 high quality bases) assembled on 2008-04-28
> FMO01932.5prime
CAGTCGACATGTACCAGGAATACCTATACCAACTGCGGGCCACCATCACC
CCGATGTGCCACGAGGAGCTGAAGGAACTGCTGAACGATGACGACAAGCT
GGACGAGAAGGTTGACGAAGTTCTCCAGGTGCTCCGAACACAAAAGACCA
GTGTTTTCGAGGACAACAGGAGTCGGGCGGAGCGCAATATCGAGCGGGAG
CCGCAGATCATCGAGCTGCGGGGGCAGCTGGCAGAACTCTCGGAGGATGG
GCGCACCAGGTGCTCCTCTGTCCAGGAGAAACTCTCACAGCTCAAGGAGA
AGTCGGGCGGAGTGGGCCTTGAAACGGCGCTGGCCCTGCTGCAGACAGCT
GCCTCCGAGAGCGAGGAGCAGACCGAGGAGATGGTCAAGAAGTTCAACGA
CAGCGATATCGGCGTGGAGGACTTTCTGGACGCGTTCCTCCCTATCCGGA
GGACCATGCACCTGCGTCGCCTCAAGGCCGAAAAAATGCAGGAGCTGATG
CGCAAACAGCGCCAGGGTCCGGGCCCAAATACTTCTCTGCCAGCCTACGG
AAACGTGCCCTCCAGCGGATTCTATCCCGCGTCTGGGGGCTCCGCCCCTT
ACCCAATCATGGGTCCCCTGATGCCCATGCCACCGCCATCCAGACCGTAC
GCAAGCTTTCTAGACCAT
FMO01932.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps37B-RC | 1041 | CG1115-RC | 113..754 | 9..650 | 3210 | 100 | Plus |
| Vps37B-RB | 975 | CG1115-RB | 113..754 | 9..650 | 3210 | 100 | Plus |
| Vps37B-RA | 1024 | CG1115-RA | 113..754 | 9..650 | 3210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5226270..5226911 | 9..650 | 3210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:24:20 has no hits.
FMO01932.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:39 Download gff for
FMO01932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1115-RA | 103..761 | 1..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:59 Download gff for
FMO01932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1115-RA | 105..763 | 1..658 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:11 Download gff for
FMO01932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps37B-RA | 105..763 | 1..658 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:11 Download gff for
FMO01932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5226262..5226915 | 1..655 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:59 Download gff for
FMO01932.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1051984..1052637 | 1..655 | 99 | -> | Plus |
