FMO01935.5prime Sequence
933 bp (933 high quality bases) assembled on 2008-04-28
> FMO01935.5prime
CAGTCGACATGAAAAACCTGAGTGAGACGGAAGCCGAAGTCACCATGCAA
GAAAATGTAGTCCACGAATCATTGCCCCAGATCCCGGTGGCCACTTCGGT
GAGCTGTTGCTTCGTTCTGGCTGTTCTGTACGTGGGTAGCCTCTACATCT
GGAGCACCAAACACAACCGGGATCATCCAACCACGGTCAAGAGAAGATTC
GCCAGTGTGTCCATGGTGATGCTGGCAGCCCCGTTCTTCGTTTACTTCTT
CTCATCGCCGGAGCTGCTCAGCCGGGTACCATTTCCCAAGCTGCTCGGTT
TGCGCTTGGAGGGATTGTGGCAGGCTGTTGTTATACCATACAGCCTGACG
GTGCTGCTCTTCCTGGGACCCATCTTTGTCAACATGCAGAACGAGTCCGT
GCGCTCCTACTTCGATCTGGACTACTGGAGGGGATCATTTGGCAGCATCA
TCTGGGTGCGCAACCATGTGATAGCACCGCTGAGCGAGGAGTTCGTGTTC
CGAGCCTGCATGATGCCCCTGATCCTGCAGAGCTTTTCGCCCCTGGTCGC
CGTTTTCATAACGCCGCTTTGCTTCGGAGTAGCCCACTTGCATCACATAG
CCGAACGCCTGAGCTTAGGCGTGGAGTTGAGCACTGCCCTATTGATTGGA
CTGTTCCAGTTCATCTACACCACGCTATTTGGCTTCTATTCGGCCTTTCT
ATTTGCCCGTACAGGTCATGTGATGGCTCCCATCTTGGTGCACGCGTTTT
GCAATCACATGGGTCTGCCGGATCTGCAGGATCTGTGGCAGCAGGATCTC
TGGCGACGAGTAGTGGACCATTATTCTCTACTTAGCTGGATTTGTTGGAT
GGATGTTCCTGGTACCACTGGCTACCGATCCGTCGATCTATGATAACAAT
CCTTTACTGGAATGCAGCAAGCTTTCTAGACAT
FMO01935.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sras-RA | 1271 | CG4852-RA | 88..993 | 9..916 | 4445 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5564325..5564825 | 414..916 | 2370 | 99 | Plus |
| 3L | 28110227 | 3L | 5563861..5564266 | 9..414 | 2030 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:38 has no hits.
FMO01935.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:42 Download gff for
FMO01935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4852-RA | 174..1092 | 1..924 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:57 Download gff for
FMO01935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sras-RA | 80..998 | 1..924 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:53 Download gff for
FMO01935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sras-RA | 80..998 | 1..924 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:53 Download gff for
FMO01935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5563853..5564266 | 1..414 | 99 | -> | Plus |
| 3L | 5564326..5564830 | 415..924 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:57 Download gff for
FMO01935.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5556953..5557366 | 1..414 | 99 | -> | Plus |
| arm_3L | 5557426..5557930 | 415..924 | 98 | | Plus |
