FMO01936.5prime Sequence
803 bp (803 high quality bases) assembled on 2008-04-28
> FMO01936.5prime
CAGTCGACATGACCACAGCAGCGCGTCCGACCTTCGATCCAGCCCGCGGA
GGATCCGGTCGCGGCGAAAAGGATCTGAGTGCACTGAGCAAGCAGTACTC
CAGTCGCGATTTGCCAGGCCACACGAAACTGAAATACAGGGAGACTGGCC
AGGGCACCAGCGATGAGAACCGCAACCGTGACTTCCGCAAGGAGCTGGAG
GAGCGCGAACGTGAGGCGCGCTCCGGAACGGGAGCCACTTCGTCGTCGTC
GGGCAAGGCACTGCCCTCCATTGTACGCAAGGCGATTGAGGCGAACAACG
CCGGCGGTGGCAGCAGTGCCGCAAAGCGTTCCAAGCCGGACGCAGGGCAG
CAGCAAGCGCAGCAGGCGGCTCAGCAGCAGGCCGCCAATATGGACGCCGA
TGAGCCGCTGGACAACGATAGCTCCGATTCGGACAGCGATTCCGATGACG
ATGATGCCGCCCTGCTGGCCGAGCTGCAGAAGATCAAGCAGGAACGTCTG
CAGGAGACGGCGCGTCGCGAGTCGGAAAAGAAGCAGGAGGACGAACGCAT
ACGCATGGAGAACATCCTGTCCGGCAATCCACTGATGAACTATGAGCCCG
GCACCGCCGCCTCGGCAGCGGGACGTGCCTCTGGACTGGGCGGTGATCTA
AAGATAAAGCGCCGCTGGGACGATGATGTGGTCTTTAAGAATTGCGCCAG
ATCTGCGCCCGATAAGAAGACGCACTTCGTCAATGACGCCCTGCGCTCCG
ATTTCCACAAGAAGTTCATGGACAAGTACATTAAGGCAAGCTTTCTAGAC
CAT
FMO01936.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
c12.1-RA | 1246 | CG12135-RA | 102..878 | 9..785 | 3885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9318283..9318931 | 785..137 | 3245 | 100 | Minus |
X | 23542271 | X | 9318991..9319122 | 140..9 | 660 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:17:00 has no hits.
FMO01936.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:44 Download gff for
FMO01936.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12135-RA | 113..904 | 1..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:05 Download gff for
FMO01936.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
c12.1-RA | 92..883 | 1..791 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:06 Download gff for
FMO01936.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
c12.1-RA | 92..883 | 1..791 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:06 Download gff for
FMO01936.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9318278..9318928 | 140..791 | 99 | <- | Minus |
X | 9318992..9319130 | 1..139 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:05 Download gff for
FMO01936.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9212311..9212961 | 140..791 | 99 | <- | Minus |
arm_X | 9213025..9213163 | 1..139 | 97 | | Minus |