FMO01942.5prime Sequence
818 bp (818 high quality bases) assembled on 2008-04-28
> FMO01942.5prime
CAGTCGACATGGACTTCCAAAACCGCGCCGGCGGCAAGACCGGCAGCGGA
GGCGTAGCCTCCTGGTCGGAGACGAACCGCGACCGCAAGGAGCGACTGCG
TCAACTGGCCCTGGAGACAATCGATCTGAACAAGGATCCGTACTTCATGA
AGAACCATCTGGGCTCCTACGAGTGCAAACTCTGCCTGACGCTGCACAAC
AACGAGGGCAGCTATTTGGCCCACACGCAGGGCAAGAAGCATCAGGATAA
TCTGGCAAGAAGAGCCGCCAAGGAGGCAAAGGAGGCACCCTCTTCGCTGC
TGGCGCCCGAGAAGCCCCGCGTGGAACCGAAGAAGTTCGTCAAGATTGGA
CGACCCGGCTACCGGGTGACCAAGCAGCGTGAACTCAGCAACGGCCAGCA
GTCGTTGCTCTTTCAGGTGGACTACCCGGAAATCACGGAGTCCATTGTTC
CGCGTCACCGCTTCATGTCCGCCTACGAGCAAAAGATCGAGCCGCCAGAC
CGCAAGTGGCAGTACCTTCTCTTTGCCGCCGAGCCGTACGAGACCATAGG
GTTCAAGGTGCCGTCCCGCGAAGTGGAGAAGAGTGAGGGCAAGTTCTGGA
CGCACTGGAACCGTGACACCAAGCAGTTCTTCCTTCAGTTCGCCTTCAAG
TTCGAACCTAAGATCCTGCCGCCACCGCCGCCGAATCTACATAGGGCACT
AGGCCCCCCAGGCGGATTCCCCATGCCGGGACCGCCACGTCCTGCTATGC
ATCCCATGTTCAATGGCGTTCATCCACCGCCACCCATGCTTTCAAACAAC
GCAAGCTTTCTAGACCAT
FMO01942.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10754-RA | 992 | CG10754-RA | 113..904 | 9..800 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12813116..12813907 | 800..9 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:24 has no hits.
FMO01942.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 17:59:50 Download gff for
FMO01942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10754-RA | 97..893 | 9..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:45:41 Download gff for
FMO01942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10754-RA | 113..909 | 9..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:32 Download gff for
FMO01942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10754-RA | 113..909 | 9..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:32 Download gff for
FMO01942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12813111..12813907 | 9..808 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:45:41 Download gff for
FMO01942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12806211..12807007 | 9..808 | 99 | | Minus |
