FMO01950.5prime Sequence
767 bp (767 high quality bases) assembled on 2008-04-28
> FMO01950.5prime
CAGTCGACATGCTGTTTCTAAAGGACAAGCGTACCACTCTGGACGTAGCA
GAGCACACAGTAATCATACCGAGCATTTGCGTGGGAAACGCGGCGCAGCT
GGCCTGTGACCTGTTGATTGCGTCCAAGGAACTCCGGCGAATTGGATCCA
TCACACATCCAGCCCTGATTCCGGTCTACGGACCCTCCGCCTATCAGCAC
GAGCCCAAAGAGAAGGTCTCCTCCTGCGAACTGTACGAGGGTACGGAGGA
TAAGCTACTGGTCGTGCAATTCCGGGCGCCATGGGTTGCCCGCCACACCG
CGCATTTTCAGAAGGAACTAGTGGAGCTCCTCAAGGGCGCCAGACGCGTA
GTCATTCTAAGCGGCAGTTTCGGCTTCGAGAAACGAGTCATTGAGGAGTC
GCCATGGGCATACCGCGCCAGCGAAAACTTCAAGGAAGCGCATGCTGCCC
AGCTGGGCAATGAGGAGCTGATCAAGTGGAAGGAGCACAAGGGCGATGCC
ATCTATGGCGGCGGCAATGCCTTGCAGTTGTTTAAAGCCTTCGATGAGCA
GAAGGTGCCCGTCATGCTGTTATTCCGCTATCTCCTCGAGGGCGACAACT
CCACCGATGCATCTCTAATCGTCCGGGAACTGAACGAACTCTGCGAAGAC
TTCCTTCAGCTGCGCAACGGAGGCGATGGCAGTTTTAAGCTCACCGTGCC
CAAGTCCTGGAACCTACTATTCGGCAATGATGTTACGGAACTTCTTTTTG
CAAGCTTTCTAGACCAT
FMO01950.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 903 | CG12321-RA | 103..843 | 9..749 | 3705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18187865..18188605 | 749..9 | 3705 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:25:06 has no hits.
FMO01950.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:02 Download gff for
FMO01950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 58..808 | 9..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:16 Download gff for
FMO01950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 9..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:24 Download gff for
FMO01950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 9..761 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:24 Download gff for
FMO01950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18187855..18188605 | 9..761 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:16 Download gff for
FMO01950.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14013577..14014327 | 9..761 | 99 | | Minus |
