FMO01961.5prime Sequence
773 bp (773 high quality bases) assembled on 2008-04-28
> FMO01961.5prime
CAGTCGACATGATGCAGCCGAGACTAGTGATTTTGGGTCTGATCGGATTG
ACGGCGGTGGGCATGTGCCACGCCCAGGGACGCATCATGGGAGGGGAGGA
CGCGGACGCCACAGCCACGACCTTCACCGCCTCCTTGCGGGTGGACAATG
CCCATGTGTGCGGCGGTAGCATTCTCTCCCAGACCAAAATCCTGACCACC
GCCCACTGTGTGCATCGCGATGGAAAGCTAATCGATGCCAGTCGCCTGGC
GTGCCGCGTGGGCAGTACCAACCAGTATGCTGGTGGCAAGATTGTCAACG
TGGAATCGGTTGCAGTGCATCCGGACTACTATAATCTGAACAACAACCTG
GCCGTGATCACGCTGAGCTCTGAGCTGACCTACACCGATCGGATCACTGC
CATCCCGCTGGTCGCCAGCGGAGAGGCACTGCCCGCCGAGGGATCGGAGG
TGATCGTGGCCGGCTGGGGACGCACCAGCGACGGCACCAACTCCTACAAG
ATCCGTCAGATATCGCTAAAGGTGGCCCCGGAGGCGACCTGCCTGGATGC
GTACAGCGATCACGACGAGCAGAGCTTCTGCCTCGCCCACGAGCTGAAGG
AGGGCACCTGCCACGGAGACGGAGGCGGTGGTGCCATCTATGGCAACACG
TTGATCGGGCTGACCAACTTTGTGGTGGGCGCCTGTGGCTCCCGCTATCC
GGATGTCTTTGTCCGACTCTCCAGCTACGCGGATTGGATCCAGGAGCAGA
TCGCCGCAAGCTTTCTAGACCAT
FMO01961.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spheroide-RA | 1263 | CG9675-RA | 76..822 | 9..755 | 3735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16700887..16701412 | 755..230 | 2630 | 100 | Minus |
| X | 23542271 | X | 16701677..16701897 | 229..9 | 1105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:05:52 has no hits.
FMO01961.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:13 Download gff for
FMO01961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9675-RA | 60..806 | 9..755 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:03 Download gff for
FMO01961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spheroide-RA | 76..822 | 9..755 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:36 Download gff for
FMO01961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spheroide-RA | 76..822 | 9..755 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:36 Download gff for
FMO01961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16700887..16701412 | 230..755 | 100 | <- | Minus |
| X | 16701677..16701897 | 9..229 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:03 Download gff for
FMO01961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16594920..16595445 | 230..755 | 100 | <- | Minus |
| arm_X | 16595710..16595930 | 9..229 | 100 | | Minus |
