FMO01968.5prime Sequence
875 bp (875 high quality bases) assembled on 2008-04-28
> FMO01968.5prime
CAGTCGACATGTCCCTGATTGCCCAGGCGAGTCGCACAGTGCCGCAGCTA
CTGTTGCACTTGAACCGCCATCTGGTCACCTCCTGCTCAAGCGCCGCATC
CGCCACGTCCTCGAAACCGCCGGATGTCGACCAGTCGATCACTGCCGACC
AGCTCCTCGGACCGGAATCGCAGCGCAGGTGCATGGAGAAGATGCGCAGC
CTGCCGGCATTCCCGCGTCCCAAGGCGCTCACGCCCAGTCGCCGGGAAAA
GCAGACATCCGCGGTTCTTATCGCCCTCTGCCAGGAGCGCGGCACGAATG
AAATATCCCTACTATACACCCGACGATCGCGACACCTGCGCAGCCACAGC
TTTCAGATCTCCTTTCCGGGCGGAAGGCGCGATGATCACGACTCGAGCTA
CGTGGACTGTGCGCTGCGCGAAACAGAGGAGGAGATCGGCCTACCGCGCC
ATCGCATCCAGGTGTGGGGCGAGGCCAAGCAGCTACAGCTGCCGAGGACC
TCGTCGATTGTGCCAGTGGTGGGCGTGGTGCCGGACTTTAGCCTCTCCGA
GCTGCGTCTCAACTGGGAGGAGGTGGAGGAGGCGTTTAGTGTGCCGCTCA
CTTCGCTAATGCTGCCCAAGGCCACCAGGCACACACAGTTTCGTAGCGGC
TACAGCGGTCCAGTATTTGTTGTAGACCATTATCGCATCTGGGGCATCAC
CGGCTATCTGACGCACCTCTTCCTGCACTGCCTGCTGCCACCCAATTTGC
TGCCCGATTGCCTCAAGACGAACATCAAGTTCATTCGGCCCTTTAAGCTA
CCGCCCAAGCTGCCGCATCATCGCGAGCACTCCGCCGGGGATCCCTCGAT
GCGCACCGCAAGCTTTCTAGACCAT
FMO01968.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11095-RA | 1121 | CG11095-RA | 76..924 | 9..857 | 4245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13812112..13812673 | 296..857 | 2810 | 100 | Plus |
| X | 23542271 | X | 13811759..13812046 | 9..296 | 1440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:05:49 has no hits.
FMO01968.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:21 Download gff for
FMO01968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11095-RA | 61..909 | 9..857 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:01 Download gff for
FMO01968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11095-RA | 76..924 | 9..857 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:33 Download gff for
FMO01968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11095-RA | 76..924 | 9..857 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:33 Download gff for
FMO01968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13811759..13812045 | 9..295 | 100 | -> | Plus |
| X | 13812112..13812673 | 296..857 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:01 Download gff for
FMO01968.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13705792..13706078 | 9..295 | 100 | -> | Plus |
| arm_X | 13706145..13706706 | 296..857 | 100 | | Plus |
