FMO01974.5prime Sequence
845 bp (845 high quality bases) assembled on 2008-04-28
> FMO01974.5prime
CAGTCGACATGAGATTGGTCATCTTGGAAACCAGCGACTCGGTGGGCAAG
TGGGCGGCCAAATATGTGATGAAACGCATCAATGACTTTCAGCCGAGTGC
CGACAGATACTTCGTTTTGGGCCTGCCCACGGGATCTACGCCATTGGGAA
TGTACAAAGAACTGATCGAGTTTCATAAGCAGGGCAAGGTATCCTTTCAG
TATGTGAAAACCTTCAATATGGATGAGTATGTGGGACTGGCCAGAGATCA
CCATGAGAGCTATCACTACTTCATGTGGAACAACTTCTTCAAGCACATCG
ACATTGAGCCCAAGAATGTGCACATTTTGGATGGCAATGCAGCTGATCTG
GTGGCCGAGTGCAATAAGTTCGAGGATCAGATCCGCGAGGCTGGAGGAGT
GGAGCTGTTCATCGGTGGCATCGGACCCGATGGCCATATTGCCTTCAATG
AGCCCGGCTCCTCATTGGTGTCCCGAACGCGGGTGAAAACTCTGGCGCAG
GATACACTTGAAGCGAATGCCCGTTTCTTTGACAACGATATGAGCAAGGT
GCCCAAACAGGCTTTAACCGTGGGCGTTGGCACTGTGATGGACTCCAAGG
AGGTGATGATCCTCATCACCGGAGCTCACAAGGCATTTGCCCTGTACAAG
GCCATCGAGGAGGGTGTGAATCACATGTGGACCGTCAGTGCCTTCCAGCA
GCATGCAAATACCCTGATGATCTGCGACGAGGATGCCACTTTGGAGCTGA
GAGTTAAGACCGTTAAATATTTCAAGGGCATTCTCAGAGATCTAGACGAA
GGCTCCCCACTGGAGGGCTACAAAAACGCAAGCTTTCTAGACCAT
FMO01974.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Oscillin-RH | 1299 | CG6957-RH | 218..1036 | 9..827 | 4095 | 100 | Plus |
Oscillin-RF | 1388 | CG6957-RF | 218..1036 | 9..827 | 4095 | 100 | Plus |
Oscillin-RC | 1206 | CG6957-RC | 208..1026 | 9..827 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5548167..5548710 | 234..777 | 2720 | 100 | Plus |
2L | 23513712 | 2L | 5547971..5548101 | 105..235 | 655 | 100 | Plus |
2L | 23513712 | 2L | 5547815..5547912 | 9..106 | 490 | 100 | Plus |
2L | 23513712 | 2L | 5549015..5549067 | 775..827 | 265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:27 has no hits.
FMO01974.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:28 Download gff for
FMO01974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6957-RB | 546..1374 | 1..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:28 Download gff for
FMO01974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oscillin-RC | 208..1026 | 9..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:35 Download gff for
FMO01974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Oscillin-RC | 208..1026 | 9..827 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:35 Download gff for
FMO01974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5547805..5547912 | 1..106 | 96 | -> | Plus |
2L | 5547973..5548100 | 107..234 | 100 | -> | Plus |
2L | 5548168..5548709 | 235..776 | 100 | -> | Plus |
2L | 5549017..5549067 | 777..827 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:28 Download gff for
FMO01974.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5547805..5547912 | 1..106 | 96 | -> | Plus |
arm_2L | 5547973..5548100 | 107..234 | 100 | -> | Plus |
arm_2L | 5548168..5548709 | 235..776 | 100 | -> | Plus |
arm_2L | 5549017..5549067 | 777..827 | 100 | | Plus |