FMO01975.5prime Sequence
635 bp (635 high quality bases) assembled on 2008-04-28
> FMO01975.5prime
CAGTCGACATGTGCGACTACAAGGTCTCGGAGCGGGCGTACGCCAAGTTG
ATATTCCACGCGGCCAAGTATCCACACCAGGCGGTCAACGGACTCTTGCT
GGCCGAGAAGACATCGAAGGGCTCCCAAGTGGAAATCGTGGATGCGATTC
CGCTTTTCCACCAGTGCCTGTATGTCACCCCCATGGCGGAGGTGGCCCTC
ATGCTGATCGATGCCCACGCCGAACGGGAAGGATTAGTAATCGCAGGCTA
CTACGCAGCACCGGAGAACTTCTACGACAACCAGGTCGACAAGACCCCAG
CCGCCAAGATAGCTGACAAGATCCAGGAGAACTTCAAGAACGCCTGCTTT
GTGGTGGTGGACAACAAACTGATGACGCTGCAGCACGACCGAGCCGCCAT
CCAGGTATTCAACTGTCCCGGAGACTCTGGAGCAAGGTGGTCAAAGGCCA
AGTTTACGCTCTCACAGGCGTCCGATACATTGGAAGGCGTGTCGCTGCTG
CTGAAGCGCGGAGCCATGCGGGATTTGGTTGACTTTGACAACCATCTAGA
TAATCCGGACAAAAACTGGACCAACGACTTCCTGAATCAGCCGCTCAACG
ATCTGCAGAAACTGTACGCAAGCTTTCTAGACCAT
FMO01975.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3501-RA | 888 | CG3501-RA | 92..700 | 9..617 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22881510..22881921 | 617..206 | 2060 | 100 | Minus |
2R | 25286936 | 2R | 22882402..22882599 | 206..9 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:19:32 has no hits.
FMO01975.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:29 Download gff for
FMO01975.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3501-RA | 84..697 | 2..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:29 Download gff for
FMO01975.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3501-RA | 87..700 | 2..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:02 Download gff for
FMO01975.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3501-RA | 87..700 | 2..617 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:02 Download gff for
FMO01975.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22881510..22881920 | 207..617 | 100 | <- | Minus |
2R | 22882402..22882604 | 2..206 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:29 Download gff for
FMO01975.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18769033..18769443 | 207..617 | 100 | <- | Minus |
arm_2R | 18769925..18770127 | 2..206 | 98 | | Minus |