FMO01976.5prime Sequence
398 bp (398 high quality bases) assembled on 2008-04-28
> FMO01976.5prime
CAGTCGACATGGATCAACTCAAACTCAGACCTTGTAACTGCCTTACCGCA
CATCCACTGGCAGAGTGGGTGTGGGTGGAATGTGAGCGGCTGTGCACCCT
TCGTCTTGCCAGTTTTCGAAAAGGGTTCTCCGAAAAGGGTTGCCACCGCA
CCCCGATGCCCATTGAGGACTCATGGAGCAAACGGTTTCGGCATTTCCCT
TTTGTTTCCGCCTGCATCCTTTGGCCAAGACACGGACACCTTCCCCTTCC
CACCACGCTGCCACAATGGAAAATACAATTTTCGCAATCTTTGCTTATCT
TTTCATCTCTCTGTGGCTGCCTCGTTTGCTGCACGATTCGTTGTTGCTGC
TGTTGGCCATCCAGAAAATCGGTAAAAAGCGCAAGCTTTCTAGACCAT
FMO01976.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33062-RB | 933 | CG33062-RB | 245..616 | 9..380 | 1845 | 99.7 | Plus |
CG33062-RA | 954 | CG33062-RA | 266..637 | 9..380 | 1845 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19442106..19442394 | 380..92 | 1445 | 100 | Minus |
3L | 28110227 | 3L | 19446035..19446118 | 92..9 | 405 | 98.8 | Minus |
Blast to na_te.dros performed 2014-11-28 22:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1536..1626 | 355..267 | 117 | 63.4 | Minus |
FMO01976.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:24 Download gff for
FMO01976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33062-RA | 258..641 | 1..385 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:46 Download gff for
FMO01976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33062-RA | 258..641 | 1..385 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:46 Download gff for
FMO01976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19442102..19442393 | 93..385 | 99 | <- | Minus |
3L | 19446035..19446124 | 1..92 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:24 Download gff for
FMO01976.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19439135..19439224 | 1..92 | 94 | | Minus |
arm_3L | 19435202..19435493 | 93..385 | 99 | <- | Minus |