FMO01978.5prime Sequence
1211 bp (12 high quality bases) assembled on 2008-04-28
> FMO01978.5prime
CAATCCACATGTCGTACAAGGTGGAACCATTGCCCGATTCCTACACCGGA
CTGGGCGAGGGTCCCCATTGGGATGTGGCCAGGCAAAGCCTGTACTACGT
GGATTTGGAGGCGGGCAGCCTGCTCCGCTACGACTATGCCCAGAACAAGG
TCTACGATACCAATATCGAGGGCGAAACCTTGGCCGGATTCTTGCTGCCG
GTGGAGGGACGTCCGCAGGAGTTCGCCGTCGGCTGCGGTCGACGCGTGGT
GATCGTCAACTGGGATGGCGTCTCGCCCAGCGCCAAGGTGGTGCGCACAC
TGTTCGAGGTGCAACCACTGATGGAGAAGAATCGTATGAACGACGCCCAG
GTTGATCCCCGGGGTCCCTTCTTTGGCGGCACCATGCCCTACATTGGAGA
TGAATTCCAGTTCCGGCACGGCAAGATGTACCGCTGGGAGGTCGGTGGCC
AGGTGGCTTCGATCAAGGACGATGTGGGCATCTCCAATGAACTGGATTGG
GACGAGAATGACTCTACTTTCTACTACATCGATACCACCGACTACGAGGT
GAAGTCGTATGACTATGATTTCGAGACCGGTGTGACTAGCAATCCCAAGG
TTATATTCCATCTGCGCAAGAACAATCCCAAGGATCATCTGCTGCCCGAT
GGCCTGACCATCCATACTCAGGGTGAGCTGTATGTGTGCACCTTCAATGT
AGCCACCATCTACAATGATTCTCCCAAAATGGCAAGATTCTGCTTGAGAT
CTTGTTCCTATCATTATATTACCTCCGCCGCCTTCCGTGGCCTAACTTGG
ACATCCTGTACGTGACTCTGATTCTAAGTTCGATCAGCCCGCTCCAGCTG
GCACCACCTACAAGTGACCGGACTGAACGCCACCGGCTTATCCCGGATGA
CACCTGATCGATCACAAAGCTATCTAGACATTCGATTTGTCGCGCAGGGC
CAAGTAATCGTCCTATCTAATCATCATCATATCATAATCCACTGACTATG
AGATCCTGCCATGACTAATGCTTGATTCTCACGAAATAAAACGCCCGGCA
GCACGATTGTATCTGAAAAAGTCAGATGGATGCTGAGTCTTTACCGGATC
TCTCAGCGGAGTCGAACACTCGATATCAATTACGTCTGTCCTGCATCATC
GAATGGTGCAATCGTAACATCGCCCAACTGAATACACTTGAACGGGATCA
TTGACATCCGT
FMO01978.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| regucalcin-RD | 1083 | CG1803-RD | 85..977 | 9..896 | 3210 | 91.1 | Plus |
| regucalcin-RB | 1458 | CG1803-RB | 143..1035 | 9..896 | 3210 | 91.1 | Plus |
| regucalcin-RC | 1097 | CG1803-RC | 99..991 | 9..896 | 3210 | 91.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12016003..12016709 | 9..715 | 2725 | 92.4 | Plus |
| X | 23542271 | X | 12016782..12016945 | 730..888 | 395 | 88.4 | Plus |
| 3R | 32079331 | 3R | 14746821..14747125 | 313..9 | 220 | 71.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:53:32 has no hits.
FMO01978.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-05-23 17:58:58 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-05 01:08:10 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 23:43:34 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:34 Download gff for
FMO01978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12015997..12016721 | 1..727 | 91 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:10 Download gff for
FMO01978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11910030..11910754 | 1..727 | 91 | -> | Plus |
