FMO01983.5prime Sequence
1005 bp (994 high quality bases) assembled on 2008-04-28
> FMO01983.5prime
CAGTCGACATGTGGAAATACGGTCAAAACCAGGGTAATCAGGGACCATCG
AGCGGCGGCGGAGGAGGCGGGGGCCCCAACATGATGCCGATGGGTGGATT
TGGCATGCAGCACGGCAATATGCAGCAAATGCACATGTCGCCTCAACATC
AACAGCAGCAACAACAAATGGGCATGATGGGCGGCCCGGGTAGCATGCAG
ATGAATCCCCAAGGACCTGGAGGTCCTGGCGGCCTGATGCCCGGCATGTC
TCCGCAGCACCAGATGCAGCAACAGCAGCAGCAGCAGATGATGCAGCAGC
AAATGATGGTGCCCCAACAAGGAGTGGGCGTCGGAGTGGGAATGGGCGGT
GGTGTGGGAATGGGCGGAGGGGGAGTGGTTCCACAGCAGCAGCAACAGCA
GCCCCAACAAAACATGCCCCAGCAGAACATTCCCCAACAGCAACAGCAAC
TCAATCCGGTCGCAGGAATTCCACCCGGTGGAGCCGGGGGCAGCAACAAT
ATGCTGGCTATCTCGCAGCAAAATCCTCACAAGGAGATTAACATTGTGCA
GCTGTCCCGTCTCGGTCAGGAAACGGTGCAGGATATCGCCTCGCGCTTCC
AGGAGGTCTTCGCCTCCCTCAAGGGCATCCAGCCCACCTCGCACAGGGAA
ATCAGCTCCGAGAAGAAGGTGCAGGAGTACTTCCGCACCATCCGGCTGCT
CTTCAAGAGGGTGCGCATCATCTACGAGAAGTGCAACGACGCCGGAATGG
ATTACATGAGCGCCGAGAGTCTGATTCCCTACCGCGATGAGCCGGAACCG
AGAATCGAGCCCTCGCTGTGCGATGAGTACCGGAAAGTCCTGCAGGAGAA
CCATGAACTCATAGAGACCGTCAAGCTGAAGAACAGGCAGCTACGCGAGA
TCATCGATCGGACACGCATCATCATCTGGGAGATCTGCATGATGCTGGCC
ATGCGCGCTCAGCAAGCTTTCTAGACCATTCGTTTGGCGGCGCGGGCCAG
GTAGA
FMO01983.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED30-RA | 1103 | CG17183-RA | 80..1033 | 9..961 | 4670 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 653064..654010 | 955..9 | 4660 | 99.5 | Minus |
Blast to na_te.dros performed 2014-11-28 20:18:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..7112 | 122..497 | 159 | 53.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2674 | 112..457 | 144 | 53.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2369..2682 | 107..432 | 132 | 54.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2601..2958 | 108..450 | 132 | 53.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2742..2947 | 102..306 | 125 | 55.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6793 | 108..167 | 119 | 70.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2795..2852 | 140..200 | 117 | 70.5 | Plus |
FMO01983.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:00:38 Download gff for
FMO01983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17183-RA | 189..1147 | 9..967 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:22 Download gff for
FMO01983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED30-RA | 80..1038 | 9..967 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:34 Download gff for
FMO01983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED30-RA | 80..1038 | 9..967 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:34 Download gff for
FMO01983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 653052..654010 | 9..967 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:22 Download gff for
FMO01983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 653052..654010 | 9..967 | 99 | | Minus |