FMO02005.5prime Sequence
698 bp (698 high quality bases) assembled on 2008-05-06
> FMO02005.5prime
CAGTCGACATGGAGACGCCCTACACCGACCACTTGAGCCCAGAAGATTTC
GAGCACGTTTACGAGCCAGCGGAGGACTCGTTCCTGCTGCTGGATGCCCT
GGAAAAGGATCTGGAGTACCTGGACCGGCTACAGCCGAGTCTCTGCGTCG
AACTGGGCTCCGGTTCGGGTGTGATCATCACGGCGCTGGCCAAGAAACTG
GCTGGCTTTTCGCTGTGCCTAGCTACGGATATCAATCCCAAAGCCTGCAA
TGCCACTCGAAGAACTGCGACTCGGAATGGCGCTCGCTTGGATAGCATTC
GCTGCAGCCTAGCGGATGCACTGCGTCCGCGATCCGTGGACGTGCTGCTC
TTCAATCCGCCCTATGTAGTCACCAGTGACGAGGAGCTGCAGACGCAACA
GTTCGATTCGCACAGCGAATCCTCAACGGATCGCAATCTGGTTTTCTCCT
GGGCTGGTGGACAGGACGGGCGACGCGTCACGGACATTCTACTCAAGCAA
TTGGATGACATTCTTTCGCCTCGAGGCGTGCTCTACCTACTCCTGCTGCG
GGAGAACAAGCCGGAGGAGATTATCAAATACTTAGAGGGCCTCCAGTTCC
GGGCTGTTAAGTTCATGGAGCGACGCATTCCTGGCGAGCATTTGTGCATA
CTGAAGGTCACCAGGTACTTGGCATCATCAGCAAGCTTTCTAGACCAT
FMO02005.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snapin-RA | 1251 | CG9958-RA | 449..1125 | 4..680 | 3370 | 99.9 | Plus |
| CG9960-RA | 1251 | CG9960-RA | 449..1125 | 4..680 | 3370 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2758553..2759229 | 680..4 | 3370 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:19:25 has no hits.
FMO02005.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:50 Download gff for
FMO02005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9958-RA | 478..1163 | 1..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:37 Download gff for
FMO02005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 445..1130 | 1..687 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:02 Download gff for
FMO02005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 445..1130 | 1..687 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:02 Download gff for
FMO02005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2758548..2759233 | 1..687 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:37 Download gff for
FMO02005.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2758548..2759233 | 1..687 | 98 | | Minus |
