FMO02008.5prime Sequence
781 bp (781 high quality bases) assembled on 2008-05-06
> FMO02008.5prime
CAGTCGACATGAAGCTATTGGTAGTTTTCTTGGGTCTCACTCTCGTCGCA
GCAGGAAGTGCTAAGAAGGATTCCGAGGATCCTGATCACATTATAACCAA
TGGAAGCCCCGCTTATGAAGGTCAGGCACCCTATGTGGTGGGCATGGCCT
TTGGACAGAGCAACATCTGGTGCAGTGGCACTATTATAGGCGACACCTGG
ATCCTTACATCCGCTCAGTGTCTAACGGGCAGTTCCGGAGTGACCATCTA
CTTTGGAGCCACCCGGCTGAGTCAGGCCCAGTTTACGGTGACAGTGGGAA
CTAGTGAGTACGTTACGGGTAATCAACATCTCGCCCTGGTTCGAGTTCCT
CGAGTCGGATTCAGCAACCGGGTCAACCGGGTGGCCCTTCCATCACTGAG
AAATCGATCCCAGCGCTACGAGAACTGGTGGGCAAATGTCTGTGGATGGG
GAGTGACCACCTTCAGCAATGGACTCACCGATGCGCTGCAATGCGTCGAC
CTTCAGATAATGTCCAATAACGAGTGTATCGCCTTCTACGGATCCACCAC
CGTCTCCGATCAGATCCTGTGCACCCGTACGCCCAGCGGCAGATCCACTT
GCTTTGGCGATGCCGGCAGCCCCCTGATCACCAAACAGGATTCCACCGTG
GTGGGCATTTCCGCATTTGTGGCCTCCACGGGTGCACCTTGGGATTGCCC
GCTGGATTTGCTAGGATCACCAGCGCACTGGATTGGATCCATCAAAGGAC
TGGAATCGCCTACGCAAGCTTTCTAGACCAT
FMO02008.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3088-RA | 836 | CG3088-RA | 20..776 | 8..763 | 3760 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9600550..9601306 | 763..8 | 3735 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:36:14 has no hits.
FMO02008.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:52 Download gff for
FMO02008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3088-RA | 9..768 | 8..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:23 Download gff for
FMO02008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3088-RA | 20..779 | 8..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:17 Download gff for
FMO02008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3088-RA | 20..779 | 8..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:17 Download gff for
FMO02008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9600544..9601306 | 8..768 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:23 Download gff for
FMO02008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9593644..9594406 | 8..768 | 99 | | Minus |
