FMO02009.5prime Sequence
1244 bp (666 high quality bases) assembled on 2008-05-06
> FMO02009.5prime
CAGTCGACATGTCCGAGGTCGAAAGAGCTCTGGATGTTCTGCTCCAGGAA
GCGGAGGAGCTGTGCATCGGGAGCAGCGTAGTGGAGCTGGACAGGATTCC
AACCGCCTTGGAGTTTTGTCGGGAATTCTACTCCAAAAACCAGCCGGTGG
TCATTCGCAAGGCACTCAATTGGCCCGCGATTGGCAAATGGACGCCAAAG
TACCTGATCGAGGCTCTCGGGGACAGGAGCGTGGATGTGGCAATCACCCC
GAATGGCTATGCCGACGGCTTGGCCACTCAAAATGGACAGGAGTACTTCG
TTTTGCCGCTGGAAACAAAAATGAAGCTGTCCGAGGTGGTCCGCCGCCTG
GATGATCCCACTGGTGCTGTCCACTACATACAAAAGCAGAACTCTAACCT
CAGTGTGGACCTACCGGAACTGGCTGCTGATCTGCGGGTCATTGATCTCG
ACTTTGCGCATCAGTCCTTTAACAAACCGCCTGATGCTGTTAACTTTTGG
CTGGGCGACGAGCGCGCCGTTACCTCCATGCACAAGGATCCATACGAGAA
CGTGTACTGCGTGATATCCGGGCACAAGGACTTCATTCTCATCCCGCCGC
ACCAGCTTAGCTGCGTACCGCGAGGAATTTACCCTACAGGCGTTTACAAG
ACCTCAGATAGTGGTCAGTTCTACATTGAACCGTTGAGGGATGAGGAAGG
CAGCGATCAGTTCACAGAATGGGGTCAACGTTGATCCCTTGTCACCCGAC
CTGTCCAAATATCCGGAGTACGCCCGGGCCAACCCTCTGAAAGTACGTGT
TCAGCGGGAGACATCCTATACCTGCCAACTACTGGTTCACCCATGTGTCC
CAAAGCCAAAAGTGCATCGCCGTGAACTTCTGGTACGATCTGGACTACAA
TAGCCGGGACTGCTACTACCGCATGCTGGAGCAGATGACGTCCGCCAAGG
AGTGGCCGCAAGCCTCTCTTAGACTGTTCGTTTGGCCCGCGGGCCCAGGG
TAGTGGCCCTAATCCAATCATAATCAGTAATCATTATTCCCCACTAACCT
AGGAATCCGGGCAGAACAAGGCTTGGAAATCCCACCCAAAAAAACCGCCC
GGGCGCGCAATCTCGAACGTTCGACGATTCAGATGGGAGTTCTCGACGCT
CTTATACTGATCTATTCAAGGATTCCCACTCGAGCTCTATATTCACGAGT
TTGGTCCCGGCCCTGGTACACTTATTTTCGACAACCTGTTGACT
FMO02009.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10133-RA | 1097 | CG10133-RA | 24..972 | 8..956 | 4445 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13449312..13450260 | 956..8 | 4345 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:38 has no hits.
FMO02009.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:54 Download gff for
FMO02009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 98..1055 | 1..961 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:22 Download gff for
FMO02009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 18..975 | 1..961 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:59 Download gff for
FMO02009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10133-RA | 18..975 | 1..961 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:59 Download gff for
FMO02009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13449309..13450263 | 1..961 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:22 Download gff for
FMO02009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13442409..13443363 | 1..961 | 97 | | Minus |
