FMO02011.5prime Sequence
856 bp (856 high quality bases) assembled on 2008-05-06
> FMO02011.5prime
CAGTCGACATGACGAGTCGCCAGCGAACTGTGATCATATTCAAATCGGAA
TCGGAAAGCAGCGATGTGTACGCAGAAACGCTGGAGAAGCACGATTTCAA
TCCCGTCTTTGTGCCCACGCTGAGTTTCGGCTTCAAGAATCTCGATGAGC
TGCGCGCCAAGCTTCAGAATCCGGATAAATATGCCGGCATCATATTCACA
TCGCCGCGCTGCGTGGAGGCCGTGGCTGAATCCCTCAATCTCGGCGAGCT
ACCCGGCGGTTGGAAGATGTTGCATAACTATGCCGTCGGCGAGGTGACCC
ACAATCTGGCGCTAAGCACCTTGGACCAGCTATTCACCCACGGCAAACAG
ACGGGCAATGCCCGGGCATTGGGCGACTATATAGTGGATACGTTCGATGG
ATCGCGTGCATTGCCGCTACTATTGCCATGCGGTAATCTGGCCACCGATA
CGCTGCTATCCAAGCTGGCCGAGAATGGCTTCTCCGTGGATGCGTGCGAA
GTGTACGAGACGCGCTGTCATCCCGAATTGGGCGCCAATGTGGAGAGGGC
ATTGGAGATTTATGGCGAGTCGATTGAATTTCTTGCCTTCTTCTCGCCAT
CGGGCGTCAATTGTGCACAGCAGTACTTCACCAGCCGTCAGCTATCGATG
GACAAATGGAAGCTGGTGGCCATCGGGCCGAGCACTAGGCGTGCCCTCGA
ATCGCTGGGCCAAAAGGTTTACTGCACCGCCGAGCGGCCGACGGTGGAGC
ATCTGGTCAAGGTGCTGCTCAATCCGCAGGACAGTCGGGAGCGGTTGCTC
AGGGAGCGCGACGGATGGCCGCCATCGAGAATAACAATGCAAGCTTTCTA
GACCAT
FMO02011.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1885-RB | 1711 | CG1885-RB | 205..1035 | 9..838 | 4115 | 99.8 | Plus |
| CG1885-RA | 1229 | CG1885-RA | 205..1035 | 9..838 | 4115 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8899230..8900060 | 838..9 | 4090 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:14:16 has no hits.
FMO02011.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:43 Download gff for
FMO02011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1885-RA | 112..952 | 1..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:18 Download gff for
FMO02011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1885-RA | 198..1038 | 1..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:56 Download gff for
FMO02011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1885-RA | 198..1038 | 1..842 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:56 Download gff for
FMO02011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8899227..8900067 | 1..842 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:18 Download gff for
FMO02011.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8793260..8794100 | 1..842 | 99 | | Minus |
