FMO02024.5prime Sequence
516 bp (516 high quality bases) assembled on 2008-05-06
> FMO02024.5prime
AAAACCAAGTTATCAGTCGACATGAAAACAAAAGATGAGAAGCCATCGCC
TTTGAAAACTGCACCGCGTAAAATAAAGGGTGAGAATTTTCCAGCCAGAA
GGATACCCGCAAATGTTTTGAAACGCACGCTTGAGATCGCCACCAGTCCC
GAAGATGGCTTTTGGGTGAACCAAAACCCATCCTGTGCTCCTCCGGCCAG
TAACGAGTTTTACTTCAGCGTTCGACGATCCACTGCGTACGAGAAACTAC
GACTGGCCCGGGATTGCCTTATGCAGCGGGACTACAAGAACTTGGCAAAA
ATACTGGCCTCCAATCATATGGGAGAAACGCTGCTCCAAAGGGCGTCCTT
TCAAATATTCACGGAATACTCCAAGGTTCTTCAAAAGTGCCCAAAGTTCT
ACACGAAAATGGAGCAGTTGCGAGTGGAGCCGACTCCTCCGACGAGACCC
ACAGATGAAGACATAGCATTAGACGATTCATTAAATGCTATTCTATCCGC
AAGCTTTCTAGACCAT
FMO02024.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| udd-RA | 989 | CG18316-RA | 72..548 | 22..498 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8106456..8106932 | 22..498 | 2385 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 20:22:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 935..971 | 271..307 | 113 | 78.4 | Plus |
FMO02024.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:04:57 Download gff for
FMO02024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18316-RA | 31..512 | 22..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:25 Download gff for
FMO02024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18316-RA | 72..553 | 22..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:00 Download gff for
FMO02024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| udd-RA | 72..553 | 22..506 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:00 Download gff for
FMO02024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8106456..8106937 | 22..506 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:25 Download gff for
FMO02024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3993961..3994442 | 22..506 | 99 | | Plus |
