FMO02029.5prime Sequence
671 bp (617 high quality bases) assembled on 2008-05-06
> FMO02029.5prime
CAATCGACATGCCACGAGGAAAGTTCGTCGACCACAAAGGTCGCAGTCGC
CATTTCACATCTCCCGAGGAACTGCAACAGGAATCGGAGGAGGATAGCGA
CCAGACCAGCGGCTCGGGATCAGATAGCGACGATAAAGACGCTGCCGGCG
GCAAAGCCAGTTCCTCTGCGTCCAAAGCCAAGGCACCCGCCACACGTAAA
GCGCCCGTGAATCGCAATCAAAAGTCTCGATCAGCGGCGGGCGCCGGTGC
GGCAAGTTCCTCGGAATCGGAGTCTGGCGAGGATTCCGACGATGACTCCG
AAGCGGAAGCGCGCGATGCCAAGAAGGGCGTGGCCTCACTCATCGAAATC
GAGAATCCCAACCGGGTGACCAAGAAGGCCACACAAAAGCTATCGGCCAT
CAAGCTGGACGACGGGCCAGCCGGTGCCGGCGGTAATCCCAAGCCGGAGC
TTTCTCGCCGCGAACGCGAACAGATCGAAAAGCAGAGAGCGCGCCAGCGT
TACGAGAAACTCCATGCTGCTGGTAAAACCACCGAGGCTAAGGCCGATCT
GGCCAGATTGGCTTTGATCCGGCAGCAGCGCGAGGAGGCGGCCGCCAAGC
GGGAGGCGGAAAAGAAGGCAGCCGATGTGGGCACCAAAAAACCGGGTGCC
AAGGCAAGCTTTCTAGACCAT
FMO02029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11444-RB | 1282 | CG11444-RB | 416..1061 | 8..653 | 3200 | 99.7 | Plus |
CG11444-RA | 1081 | CG11444-RA | 215..860 | 8..653 | 3200 | 99.7 | Plus |
CG4438-RB | 922 | CG4438-RB | 571..741 | 483..653 | 405 | 82.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 4553338..4553983 | 653..8 | 3200 | 99.7 | Minus |
2L | 23513712 | 2L | 9397180..9397350 | 653..483 | 405 | 82.5 | Minus |
2L | 23513712 | 2L | 9397617..9397747 | 138..8 | 310 | 82.4 | Minus |
2L | 23513712 | 2L | 9397397..9397498 | 400..299 | 255 | 83.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:46 has no hits.
FMO02029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:18 Download gff for
FMO02029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11444-RA | 356..1008 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:30 Download gff for
FMO02029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11444-RA | 208..860 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:03 Download gff for
FMO02029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11444-RA | 208..860 | 1..653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:03 Download gff for
FMO02029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 4553338..4553989 | 1..653 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:30 Download gff for
FMO02029.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 4447371..4448022 | 1..653 | 99 | | Minus |