FMO02032.5prime Sequence
1033 bp (1019 high quality bases) assembled on 2008-05-06
> FMO02032.5prime
CAGTCGACATGCGTCCGTTGATGCTTCAGGGCCACGAGCGTTCCATAACG
CAAATCAAGTACAACCGCGAGGGCGACCTGCTCTTCTCCTGCTCCAAGGA
TCAGAAGCCCAATGTGTGGTACTCGCTGAACGGAGAACGTTTGGGCACCT
ACGATGGTCACCAGGGTGCGGTCTGGTGCCTGGATGTGGACTGGGAGAGC
CGTAAGCTCATCACCGGCGCCGGTGATATGACCGCTAAGATCTGGGACGT
CGAGTACGGCACCGTTATCGCCTCCATTCCGACCAAGTCATCGGTGCGCA
CCAGCAACTTCAGCTTCTCGGGCAACCAGGCAGCCTACTCAACGGACAAA
GCGATGGGACAGAGCTGTGAACTGTTCCTCATCGATGTCCGCAACGCCGA
TTCCTCGTTGTCGGAGCAGGAGCCCACACTCCGCATCCCGATGACCGAGT
CCAAAATTACGTCGATGTTGTGGGGTCCTCTGGATGAGACCATCATCACA
GGTCACGATAATGGCAACATTGCCATCTGGGACATCCGTAAGGGTCAAAA
GGTGGTTGACTCTGGCACGGATCACAGCGCTGGCATCAACGACATGCAGT
TGAGCAAGGATGGCACCATGTTTGTGACCGCCTCCAAGGACACCACCGCC
AAATTGTTCGATTCGGAGTCCCTGATGTGCCTCAAGACCTACAAAACGGA
GCGTCCAGTAAACTCGGCGGCCATCAGCCCAATCATGGATCATGTCGTGC
TGGGCGGCGGTCAAGATGCCATGGAGGTGACCACTACGTCTACGAAGGCT
GGCAAGTTTGACTCGCGCTTCTTCCACCTGATATACGAGGAGGAGTTCGC
CCGACTCAAGGGCCATTTCGGACCCATCAACAGTTTGGGCCTTCCATCCG
GACGGCAGAGTTACGCCTCGGGCGGAGAAGATGGTTTCGTGCGTGTCCAG
ACATTCGATAGTACATACTTTGAGAACATCTTCGAGGCAAGCTTTCTAGA
CCATTCGGTTTGGCGCGCGGGCCAGTAAGTGGT
FMO02032.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trip1-RA | 1177 | CG8882-RA | 83..1060 | 9..986 | 4845 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4967022..4967514 | 503..11 | 2465 | 100 | Minus |
| 2L | 23513712 | 2L | 4966484..4966971 | 986..499 | 2345 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:30 has no hits.
FMO02032.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2010-07-30 09:26:03 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:39 Download gff for
FMO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trip1-RA | 83..1066 | 9..995 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:49 Download gff for
FMO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trip1-RA | 83..1066 | 9..995 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:49 Download gff for
FMO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4966471..4966968 | 502..1004 | 98 | <- | Minus |
| 2L | 4967024..4967514 | 11..501 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:39 Download gff for
FMO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4966471..4966968 | 502..1004 | 98 | <- | Minus |
| arm_2L | 4967024..4967514 | 11..501 | 100 | | Minus |
