FMO02036.5prime Sequence
929 bp (929 high quality bases) assembled on 2008-05-06
> FMO02036.5prime
CAGTCGACATGAGGCATCTGATGTTCCTAATGCTGATGGTCCTGCCCATC
GTCATCTGCACCTTCTCGGCGCCCAACAAGTTTGGAGCCTATGCCGCCGA
GGCCGTGGAGGACGACCTGGTGGACGTGGAGGGCGAGGAGGGTGCCGTTA
CTGGCGAGGATGCAGAAGCGGACGAGGATAGCGACACGGGCAGCAGCAGT
TCGCCGAATGCGGACACCTATCTGTTATTCACGAAACCCCTGTACACACC
TGGCCAGCAGCTGGATCTGCCCGGCGGCAAACCCGTCGAGTTCCTGATTG
GATTCACCAACAAGGGAGCCGAGGAATTCGTGATCGAGACGGTGGAGGCC
TCCTTCCGCTATCCCATGGACTTCAACTACTTCATCCAGAACTTCTCGGC
GGTGGCCTACAATCGTGAGGTGAAGCCCGGCTTTGAGTCGACCGTGTCGT
ACACCTTCCTGCCCTCGGATCAGTTTGCCGGCCGTCCATTTGGACTGAAC
ATTGCACTGGCCTACCGCGATGCCAATGGTATTCAGTACAACGAGGCCGT
GTTCAATGAGACCGTTCTGATTTCGGAGGTCGATGAGGGTCTGGATGGCG
AGACTTTCTTCCTGTACGTCCTGCTGGCGGGCATTGTGGTCCTGCTACTG
GTCATCGGACAGCAATATCTGCTCGGCAGCTCTGGCAAGAGGAAGCGTGC
CGCTGCCAAGAAGTGATCGAAACCGGCACGGCCAACGACAGCACCATCGA
CTACGATTGGGTGCCACAGGAGACGCTGCGTGCGCTGCAGAAGTCGCCGC
CCAAGTCCAAACGCCCAAGACCTCGCCCAAGCCCACCAAGCCGCCAGTCC
CAAGGCGGCCAGCCAGCAGAGTCCCAAGCAGCGCAAGGTCAAGCGTTCCG
CTGGCGATGATGCAAGCTTTCTAGACCAT
FMO02036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)G0320-RB | 1854 | CG32701-RB | 147..1052 | 9..911 | 4455 | 99.7 | Plus |
| l(1)G0320-RA | 1309 | CG32701-RA | 236..1141 | 9..911 | 4455 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9551942..9552783 | 911..73 | 4060 | 99.6 | Minus |
| X | 23542271 | X | 9553452..9553515 | 72..9 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:21:06 has no hits.
FMO02036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:13 Download gff for
FMO02036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32701-RA | 149..1067 | 1..919 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:07 Download gff for
FMO02036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0320-RA | 140..1058 | 1..919 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:56 Download gff for
FMO02036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)G0320-RA | 229..1147 | 1..919 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:56 Download gff for
FMO02036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9553452..9553522 | 1..72 | 94 | | Minus |
| X | 9551936..9552783 | 73..919 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:07 Download gff for
FMO02036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9445969..9446816 | 73..919 | 99 | <- | Minus |
| arm_X | 9447485..9447555 | 1..72 | 94 | | Minus |
