FMO02042.5prime Sequence
1196 bp (1030 high quality bases) assembled on 2008-05-06
> FMO02042.5prime
CAGTCGACATGGGACGTTTAATTCTGGAACACACGCTGCAGGGCCACAAG
GGGCGCATCTGGGGAGTGGCATGGCATCCTAAGGGCAACGTATTCGCCTC
GTGCGGCGAGGACAAAGCCATCCGCATTTGGTCGCTGACCGGGAACACTT
GGAGCACAAAGACCATCCTATCCGATGGCCACAAGCGCACTATTCGCGAG
ATCCGATGGTCTCCATGCGGTCAGTACTTGGCCTCGGCCAGCTTTGATGC
CACCACGGCGATCTGGTCGAAATCCTCGGGAGAATTCGAATGCAACGCAA
CATTGGAGGGTCACGAAAACGAGGTGAAGAGCGTTAGCTGGTCGCGATCC
GGCGGACTACTGGCCACCTGTTCGCGGGACAAGTCCGTGTGGATCTGGGA
GGTTGCCGGCGATGATGAGTTCGAGTGCGCCGCCGTTTTGAACCCGCACA
CACAGGACGTGAAGAGAGTGGTGTGGCATCCAACCAAGGACATTTTGGCC
TCCGCCTCGTACGACAATACCATAAAAATGTTCGCAGAGGAGCCCATAGA
CAACGACTGGGATTGCACAGCCACTCTTACTTCACACACAAGCACGGTTT
GGGGCATTGACTTCGATGCTGATGGCGAGCGCCTGGTTTCCTGTAGCGAT
GACACCACAATAAAGATTTGGAGGGCCTACCATCCCGGAAATACAGCCGG
AGTGGCTACGCCCGACCAGCAAACCGTGTGGAAGTGCGTGTGCACAGTGT
CCGGGCAGCACTCGCGGGCTATCTACGACGTGTCCTGATGCAAGCTTACA
GGTCTGATAGCGACTGCCTGTGGCGACGACGGCATTCGTATCTTTAAAGA
GAGCAGCGACTCCAAGCCAGACGAACCCACGTTCGAGCAGATACCGCGGA
GGAAGGCGCTCACGATCAGGACGTAACTCGGTGCAGTGGAATCCTGTGTG
CCGGGCAACTGATATCATGCAGCGATGATGCACCATTAAAATTTGGAAAG
TGACCGAGCAAGCTTTCTAGACATTCGTTTGGCGGCGGGCCCAGTAGTGT
CATAATCATATCATATTCATAATCATATCCCACTAGCTAGAGATCCTGTC
ATGACTATGCTTGATCCTACCAATAAAGCCTCGGCGACGAACGCTCTGAA
CAATTCGAATGGAATTCTGAGTCACTTACTGGATACTATCTCCAAC
FMO02042.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ciao1-RA | 1186 | CG12797-RA | 90..1094 | 9..1008 | 4870 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14853955..14854959 | 1008..9 | 4765 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:22:12 has no hits.
FMO02042.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:33 Download gff for
FMO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12797-RA | 105..1117 | 1..1011 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:49 Download gff for
FMO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ciao1-RA | 85..1097 | 1..1011 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:11 Download gff for
FMO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ciao1-RA | 85..1097 | 1..1011 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:11 Download gff for
FMO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14853955..14854964 | 1..1008 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:49 Download gff for
FMO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10741460..10742469 | 1..1008 | 99 | | Minus |
