FMO02043.5prime Sequence
875 bp (875 high quality bases) assembled on 2008-05-06
> FMO02043.5prime
CAGTCGACATGAGCAAAACTAGCAACATCATGCGTTTGGCGCTGCTGCAG
CTCAAGGGTTCCAAGGACAAAGTGGCCAATGTCCAAAACGCCGTCACCAA
AATCGAGGCGGCGGTCAAGGAGCATAAACCCCGATTGATCACTCTGCCGG
AGTGCTTTAATGCTCCATACGGCACCAAGTACTTTCGGGAGTACTCCGAG
ACCATTCCCGATGGCTATACCTCGCAACAGCTCTCCAATTTGGCCAGGAA
GCACCAGGTGTACATCGTGGGCGGAACAATCCCTGAACTGGGCGAAAACG
ATGCCATCTACAACACCTGCACGGTTTGGTCACCCACTGGTGACCTTGTG
GCCAAGCATCGCAAGATGCATCTCTTTGACATAGATGTCAAGGGTGGCAT
TCGCTTCAAGGAGTCGGAAACGCTGTCCGCAGGCAATGATTTCACCATCA
TCAACGTAGATGGCCACAAGATTGGCATCGGCATCTGCTACGATATTCGA
TTCGAGGAGATGGCGAGGCTCTATCGCAACGCAGGCTGCGAGATGATCAT
CTATCCGGCTGCATTCAACATGACCACTGGTCCACTGCACTGGGAGCTAT
TGCAGCGATCCCGTGCCAATGACAACCAACTCTTTGTGGTCACAACATCA
CCAGCCCGTGACACAAGCGCCGAGTATGTAGCCTATGGCCATTCCATGGT
GGTGAATCCATGGGCCAAGGTGCAGCAGAGTGCCAGTGAAAGCGAGGAAA
TCGTGGTGGCCGATATAGATTTCTCCGAGGTGGAGCAGTGCGTCAGCAGA
TTCCCGTCTTTGGGCAAAGACGTCTAGATCTGTACGCCACCGAAAGGAAA
GGCCAAAGCAAGCTTTCTAGACCAT
FMO02043.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8132-RA | 1069 | CG8132-RA | 73..921 | 9..857 | 4185 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9401641..9402463 | 28..849 | 4050 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:22:22 has no hits.
FMO02043.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:35 Download gff for
FMO02043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8132-RA | 41..905 | 1..866 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:55 Download gff for
FMO02043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8132-RA | 66..930 | 1..866 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:15 Download gff for
FMO02043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8132-RA | 66..930 | 1..866 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:15 Download gff for
FMO02043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9401641..9402479 | 28..866 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:55 Download gff for
FMO02043.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5227363..5228201 | 28..866 | 99 | | Plus |
