FMO02045.5prime Sequence
1017 bp (998 high quality bases) assembled on 2008-05-06
> FMO02045.5prime
CAGTCGACATGTCCGAGCGAAAGGTCTTAAACAAATACTATCCCCCGGAC
TTCGATCCATCGAAGATTCCGCGCATGAAACTGGCCAAAAACCGGCAGTA
CACCGTGAGATTGATGGCTCCATTTAATATGCGCTGCAAAACGTGTGGGG
AATACATATACAAGGGCAAGAAATTCAACGCTCGCAAGGAGGACGTGGAG
AACGAAACGTACCTGGGCATCAGGATCTATCGGTTCTACATCAAGTGCAC
GCGCTGCCTGCAGGAGATCTCCTTCAAGACAGATCCACAGAACACGGACT
ACGAGATTGAGGCGGGGGCCACCAGGAATTTCATGGCACTCAAGTTGGCC
GAGGAACAGGCACGTCGCGAGGAGCAGGAATTGCGCGATGAGGAGGCCAA
CAATCCGATGAAGCTGCTCGAGAATCGCACCCAACAGTCGCGCAACGAGA
TCGAAACGATCGAGAGCCTGGAGGAGTTGCGTGATCTCAACCGGCGTCAG
CAGACAGTGGACTACAACACTCTGCTGCAGCAGTACAACACGGTGGAGAC
GGAGAGAGAGCGCCAGGAGCGGGAGGAGCGCGAAGACGAGGATTTTATTA
AGTCCGTAAACTTTAAGAACAAGCCAGAAGGAAGCTCTCGTGTTGTCGCT
GAGGAAATCATTGAGGAGATCAAGGATGAACCGTTGGACACACCGTCAGC
TCCTCCACCAGCCAAACAGGCCAAGCCCAGCACGATCAGTCTTTCCGCCA
CATCCTCCAGCAAAGCATCCGCAGCGCAGTCAATGGTTAAAAGGAAGACA
CCATTGGTGCTGGTCAAGCCCAAGGCAACCGCAGTAGCAAAGCCCACGGT
AGCCACTGGAACGACGCAAGTTGAATCCAAACCAGCCGCAACCACGCCCT
CAGTTGTGTCTGCAGCAGCGGAAACTAAAGCTACAAATCAGCCAGCTGCC
GCTCAGCTGGACTTTCCCTCTTGGCTGCCTACAGTGACACTCAGAGGATC
CACGCAGCTTCTAGACA
FMO02045.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8435-RA | 1148 | CG8435-RA | 79..1071 | 9..999 | 4900 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16170135..16170705 | 603..33 | 2855 | 100 | Minus |
| 2R | 25286936 | 2R | 16169677..16170080 | 999..598 | 1890 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:38 has no hits.
FMO02045.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:37 Download gff for
FMO02045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 60..1063 | 1..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:44 Download gff for
FMO02045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 72..1075 | 1..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:53 Download gff for
FMO02045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8435-RA | 72..1075 | 1..1002 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:53 Download gff for
FMO02045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16169673..16170076 | 602..1002 | 99 | <- | Minus |
| 2R | 16170137..16170705 | 33..601 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:44 Download gff for
FMO02045.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12057178..12057581 | 602..1002 | 99 | <- | Minus |
| arm_2R | 12057642..12058210 | 33..601 | 100 | <- | Minus |
