FMO02051.5prime Sequence
916 bp (916 high quality bases) assembled on 2008-05-06
> FMO02051.5prime
CAGTCGACATGGAGGATTTTGAGAAAATTGAGAAGATTGGCGAGGGCACA
TATGGCGTGGTGTATAAGGGTCGCAACCGCCTGACGGGCCAAATTGTGGC
AATGAAGAAAATCCGCTTGGAGTCCGACGACGAAGGCGTTCCATCAACCG
CGATCAGAGAAATTTCGTTGCTTAAGGAGTTGAAACATGAAAACATTGTC
TGTTTGGAGGATGTTTTGATGGAGGAGAACCGCATATACTTGATCTTTGA
ATTCCTATCGATGGACCTCAAGAAATACATGGATTCGCTGCCAGTTGATA
AGCACATGGAGAGTGAATTGGTCCGTAGCTATTTGTACCAAATAACTAGC
GCCATTCTTTTCTGCCATCGTCGGCGAGTACTTCACCGTGATCTTAAGCC
GCAGAACTTACTAATCGACAAGAGTGGCCTCATAAAAGTCGCCGACTTTG
GACTTGGCCGATCCTTTGGCATTCCGGTGCGCATTTATACGCACGAGATT
GTTACCTTGTGGTACAGAGCGCCGGAGGTGCTACTGGGTTCACCCCGGTA
TTCCTGTCCCGTCGATATCTGGTCCATTGGATGCATATTCGCGGAGATGG
CAACGAGAAAGCCGCTATTCCAGGGTGACTCGGAAATTGACCAGTTGTTT
AGAATGTTTAGAATTCTGAAAACACCTACCGAAGACATTTGGCCGGGCGT
TACTTCGCTACCCGACTATAAGAACACGTTCCCCTGCTGGTCCACGAACC
AATTGACCAATCAGTTAAAGAATCTCGATGCGAATGGTATTGATCTCATA
CAAAAGATGTTAATCTACGATCCAGTTCATCGCATTTCCGCCAAGGACAT
TTTGGAGCATCCCTATTTCAATGGTTTTCATCGGGCTTAGTTCGAAATGC
AAGCTTTCTAGACCAT
FMO02051.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdk1-RA | 1082 | CG5363-RA | 86..976 | 9..898 | 4430 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10385140..10385646 | 661..155 | 2535 | 100 | Minus |
| 2L | 23513712 | 2L | 10384845..10385084 | 898..660 | 1150 | 99.6 | Minus |
| 2L | 23513712 | 2L | 10386029..10386177 | 157..9 | 745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:51 has no hits.
FMO02051.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:44 Download gff for
FMO02051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5363-RA | 87..985 | 9..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:35 Download gff for
FMO02051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cdc2-RA | 86..984 | 9..908 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:07 Download gff for
FMO02051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdk1-RA | 86..984 | 9..908 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:07 Download gff for
FMO02051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10384837..10385082 | 662..908 | 97 | <- | Minus |
| 2L | 10385140..10385643 | 158..661 | 100 | <- | Minus |
| 2L | 10386029..10386177 | 9..157 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:35 Download gff for
FMO02051.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10384837..10385082 | 662..908 | 97 | <- | Minus |
| arm_2L | 10385140..10385643 | 158..661 | 100 | <- | Minus |
| arm_2L | 10386029..10386177 | 9..157 | 100 | | Minus |
