FMO02058.5prime Sequence
1016 bp (997 high quality bases) assembled on 2008-05-06
> FMO02058.5prime
CAGTCGACATGTTGCATCTGAGCAAACAACTGGTGGTCAGGGCGCCCAAG
ATCCGTCTGAATGCCAGCGCTGTGAGTGGAAGTGGTCAAAGTTCAAGTTT
CGATCAAAACAGCAACAATTACAGCCGAAAACTTGTTGGCCCTAATCTCA
ATCAATGCCACAAACGCTTGTCCAGCAGTAGTCAAAGTTCGACAGCCGGC
ACGATGAAGCGTTTGGCAGGAAAAGTAGCCGTGGTCACCGCCTCCACCGA
TGGCATTGGTTTCGCGATTGCCAAAAGGCTGGCCGAAGATGGCGCCGCAG
TGGTCATCAGCAGTCGCAAGCAAAAGAATGTGGACTCTGCTCTGGCGGAG
CTGCGCAAACTGAACTTGAATGTCCACGGTCTGAAGTGCCATGTCAGCGA
ACCCGAGGATCGCAAACAGCTCTTCGAGGAGACCATCAGCAAGTTTGGCA
AGCTTAACATTCTGGTCAGCAATGCAGCCACCAATCCTGCGGTCGGCGGT
GTCCTCGAGTGCGACGAGAAGGTGTGGGACAAGATCTTCGATGTGAACGT
GAAGAGTTCCTATCTGCTGGCCAAGGAGGCACTGCCTCTCCTGCGCCAGC
AAAAGAACTCCAGCATCGTTTTCGTCTCCTCCATTGCTGGCTATGATGCC
TTTGAGCTACTGGGAGCCTATTCCGTCAGCAAGACCGCGCTGATTGGCTT
GACCAAGGCAGCCGCCAAGGATCTGGCGCCCGAGGGCATTCGCGTCAACT
GCCTGGCTCCAGGAGTCATCATGACAAAGTTCTCGAAAGCACTGTACGAG
AATGAGTCGGCGAATGAAGCGGCTTTGAGCAAATACCCATGGGTCGTCTG
GGCACCAGCGAGGAGATGGCTGGCGTGGTCTCCTTTTTGGTCTCGGAGGA
TGCGGGCTACATTACCGGAGAGTCCATTGTGCGGGCGTGAATGACAGCTC
GTTTGGCAAGCTTTCTAGATCATTCGTTTGGCGCCGCGGGCCCAGGTAGT
GTCATAATCAAATCAT
FMO02058.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10672-RA | 1082 | CG10672-RA | 97..1047 | 9..955 | 4535 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5140840..5141243 | 656..253 | 1960 | 99 | Minus |
3L | 28110227 | 3L | 5140502..5140779 | 931..655 | 1295 | 98.6 | Minus |
3L | 28110227 | 3L | 5141306..5141550 | 253..9 | 1225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:47:14 has no hits.
FMO02058.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:38 Download gff for
FMO02058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10672-RA | 105..1066 | 9..967 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:13 Download gff for
FMO02058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10672-RA | 97..1058 | 9..967 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:18:20 Download gff for
FMO02058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10672-RA | 97..1058 | 9..967 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:20 Download gff for
FMO02058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5140464..5140777 | 657..967 | 95 | <- | Minus |
3L | 5140840..5141242 | 254..656 | 99 | <- | Minus |
3L | 5141306..5141550 | 9..253 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:13 Download gff for
FMO02058.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5133564..5133877 | 657..967 | 95 | <- | Minus |
arm_3L | 5133940..5134342 | 254..656 | 99 | <- | Minus |
arm_3L | 5134406..5134650 | 9..253 | 100 | | Minus |