FMO02064.5prime Sequence
680 bp (680 high quality bases) assembled on 2008-05-06
> FMO02064.5prime
CAGTCGACATGTCGGATTCGCTGATCATTTGCGTTTCCGACTACTGGCGG
CGATGTCATTACCACAATCGTCAAAATCGTGAAGCCGGCGACGCCTGGCC
AGAAGCCAAACCGCTGCGGAGGCTGTGCATCGATGTGGACGCCATCAATG
GTAATTACTATCTTCGCGAGTTCCTGCACCAGCACGTGCTTGCCCAGAGC
CTTATGCACAATCATGGTGTCCAGCTGGTCTGGCTGCAATTCGAGGAACC
GGAGAAGCACACCATTGACTACAAATTCGCCGACATGCTGGCACACACGC
TGTGGGAGCGCATCGAGGTGGAGCACCTCATGTCCTGGCTGTCCACACTG
GGCGGCGGATTCTCCGCCCTTGGCGAGCAGTTCGAGCGATGTGCGAAAAC
GGCTGGCAAGATTTCGCTGCAGCAGTTAAAGATTGGCATGCGACTCGGTG
ATCCCTTCCTGCAGACGCGCTGCAAGCTCTACTACAGCATTTCGCTAATC
CAGCGTGGTCAACTACGGATGGCGAAGCATTTGATCCGACAGCAGTATAA
GTTTGCGAGTAGAAACATCGAGAAGGATGTGCGCCTGATGCGGATGTGTC
TGGGCATTTGGCGGCGACTTAGCTACGAGTACGAGCAGCGAAGACTGCGG
AAAGGTGGCAACGCAAGCTTTCTAGACCAT
FMO02064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12123-RA | 1044 | CG12123-RA | 224..877 | 9..662 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8441741..8442125 | 393..9 | 1925 | 100 | Minus |
| X | 23542271 | X | 8441414..8441683 | 662..393 | 1350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:56 has no hits.
FMO02064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:57 Download gff for
FMO02064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12123-RA | 215..876 | 5..670 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:39 Download gff for
FMO02064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12123-RA | 222..883 | 5..670 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:11 Download gff for
FMO02064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12123-RA | 222..883 | 5..670 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:11 Download gff for
FMO02064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8441408..8441683 | 393..670 | 98 | <- | Minus |
| X | 8441742..8442127 | 5..392 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:39 Download gff for
FMO02064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8335441..8335716 | 393..670 | 98 | <- | Minus |
| arm_X | 8335775..8336160 | 5..392 | 99 | | Minus |
