FMO02065.5prime Sequence
647 bp (647 high quality bases) assembled on 2008-05-06
> FMO02065.5prime
CAGTCGACATGAATGTCCATGGTGAGCCGGTTGTGAACGATAAGAATTTG
ATGATCCCGCCGCAAAACTACAATGTAAAGTGCTTGTCTATGGGCATGCT
GACACCTGTAGAGACCTCTGTTATCTGGCGAGGTCCTCTTGTAATGTCAG
CAATACAACGACTGCTAAAAGGTACTGATTGGGGGCTTCTAGATGTCCTA
GTTATAGATACTCCACCGGGCACTGGAGATGTACATCTCTCACTATCCCA
GCATGCACCTATCACAGGGGTTATCCTGGTAACAACACCTCATACTGCAG
CTGTTCAGGTGACCTTGAAAGGTGCAAGCATGTACGAAAAGTTAAATGTT
CCTATCTTTGGCGTAGTAGAGAACATGAAGTACACCATTTGTCAGAACTG
TAATCAACGATTGGAGTTTTTTAAAGACAGCCGTATAAGTTCTCTACCGC
GCAAGCTAATTTCTCTTCCGTTAGACTCACGAATAGCGGATAGCAACGAG
AGTGGAGTGCCTGTTGTAATAAAATATCCGGACAGCAAGTACTCTTATCT
ATTTACCCAATTGGCTGAGGAGATTACACAAATACTTAACGAACAAAGAT
GTAATCAAAATCAAAATAACAGTGCACATGCAAGCTTTCTAGACCAT
FMO02065.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3262-RF | 900 | CG3262-RF | 258..879 | 8..629 | 3110 | 100 | Plus |
| CG3262-RE | 7023 | CG3262-RE | 274..895 | 8..629 | 3110 | 100 | Plus |
| CG3262-RD | 1013 | CG3262-RD | 274..895 | 8..629 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22240239..22240860 | 8..629 | 3110 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib3 | 2883 | transib3 TRANSIB3 2883bp | 1498..1536 | 198..160 | 114 | 76.9 | Minus |
FMO02065.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:26:03 Download gff for
FMO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RA | 265..896 | 1..633 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:42 Download gff for
FMO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RD | 267..898 | 1..633 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:36 Download gff for
FMO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3262-RD | 267..898 | 1..633 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:36 Download gff for
FMO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22240232..22240868 | 1..635 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:57:42 Download gff for
FMO02065.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22240232..22240868 | 1..635 | 98 | <- | Plus |
