FMO02066.5prime Sequence
1206 bp (1034 high quality bases) assembled on 2008-05-06
> FMO02066.5prime
CAGTCGACATGCACCTGTCACACGGCCAACTGAAAGTGGTGCTCATTTTG
GCCCTGCTGCAGGAGCTGCAGGTGAAGCCGCAGCGAGAGGTGTTCCAGGA
ACTTTTCGAGAAGGATCTGCGCTTGTGTCCAGACTGTTTCGTTGGACAGA
GTGAGCCGTGCGGGGAAATCTTCCAGAAAATTGCAGAGCCCTCGGATTGG
AGTAGACTTGTGAAAGCCATTTCGTTGCTCGTTGATCGCCGAGCGATTTA
CTTTCTAAGGCTAAAAGACCGGGATCAGGAAGTCCAGCTGGTGGCCAAAA
GAAAAATCATTGATGCACAGAGTAATCAGATAAAAAATGTGAAAAAAGAT
TTCTATGAACTAGAGGAGCGACCTGGTGGTTTTCATCTCTGCCGAACTCT
GGCAAGGGAACCCCGCTTTGTTTCGTACTTGGAGCAGCGTGGACATGCTG
CCGCCAGTGTGTGGTTCTACATGATGTACTACGTTAGTCCGCTGCTTATG
CAGGAACTGCATCTGCAGGGATTTCCAGTGCCTACCACCTACGCCTCCTG
CGGACTAACACATTTTCAATCCAATGCAGGACGTACTTTAGCTCATTACG
TCGATGCTGAAGAAGGTTTGCGTGTGGAGCTGGCTCTCCAGTTGATCCAG
CTCTCCCTCAAGCTGACTTTTGGATTCGCGGACTTTCGCATTATCTTAAC
CGATTTCACGGCCGATAATTTGGCTTACGACGAAGACACCAAGAAAGTGT
ACCTCATTGATTTGGACTCCGTGGTCCTGGTGGACGCTTCGTTCGCAGCA
GGACATGCCCGAAAAGTACGAGCCGCTGACCGGCGAGGGATTCACATTTG
ATGTCTCTGCATTCTGCTCCGGCCATCAGCTGGATGCCAATATCTACCAG
GCGTGCCTTTTGCTAAGGATTACTTGCTTAAGAATTTGGACAACGAAAAG
CTGCAGCTGCTCCTGGAGCAGTGTGTAGCATGCCAGATGACTTCTGTGAT
ATGCGTTTCAACATGCTTACGACTTAATAAAGTGCTTGAAAGCATATGCA
GCTTCTTAGACCATCGTTTGGGCGCGGGACAGGTAATTGGTATATCAAAT
CATATCTAATCAAATCAACTAGCCTAGGGAGATTCTGCTAGACAGGCTTG
AATTCCACAATAAACGCCTGGGCTGCAACGAAGCTTCTGCACAGATCCAG
AGTGAG
FMO02066.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11170-RD | 1106 | CG11170-RD | 38..1076 | 9..1044 | 5030 | 99.2 | Plus |
| CG11170-RC | 1135 | CG11170-RC | 67..1105 | 9..1044 | 5030 | 99.2 | Plus |
| CG11170-RB | 1195 | CG11170-RB | 127..1165 | 9..1044 | 5030 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22177449..22178487 | 1044..9 | 4905 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:19:48 has no hits.
FMO02066.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:59 Download gff for
FMO02066.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 75..1120 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:44 Download gff for
FMO02066.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 122..1167 | 1..1047 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:17 Download gff for
FMO02066.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11170-RB | 122..1167 | 1..1047 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:17 Download gff for
FMO02066.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22177463..22178492 | 1..1031 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:44 Download gff for
FMO02066.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18064968..18065997 | 1..1031 | 99 | | Minus |
