FMO02072.5prime Sequence
797 bp (797 high quality bases) assembled on 2008-05-06
> FMO02072.5prime
CAGTCGACATGATTTGTATGCGGCTCCGGGTGTTGCGTAATCTCAATCGC
AGCGCTTTAAATGGATTTAGAAAAGATTACATCCGATCAACCGGTGTGAA
TGTCAATTATTCAGCTGTCAACTTTCCGGCCGCCATTAGAACGCTGAAAA
CTTTTAGCAATTCTATCCTAACCAAGGAACCGAAACCAATCTTTGCATTT
ATCGCATCTCAGCGGCAGTATTCTTGCGAAAAAGTAGGCAAAACAATGGA
GGAGCACTGCGTAGTTCCGGATGTGATCGCCAAGGCACCGGCGCAGACAG
CTGTGGTGGAATATCCCGGCGATATTGTCGTGAAGCCGGGTCAGGTCCTG
ACCCCCACCCAGGTGAAGGATGAGCCGTGCGTGAAATGGGAGGCGGACGC
CAATAAGCTGTACACCCTCTGCATGACCGATCCGGATGCGCCCAGTCGCA
AGGATCCCAAGTTTAGGGAGTGGCACCATTGGCTGGTGGGCAACATACCC
GGTGGAGATGTCGCCAAGGGCGAGGTTCTCTCCGCCTACGTGGGATCCGG
GCCTCCACCAGACACCGGACTCCATCGTTACGTTTTCCTGATCTACGAGC
AGCGGTGCAAGCTCACATTCGACGAGAAGCGACTGCCCAATAACAGCGGA
GATGGACGCGGTGGCTTCAAAATCGCCGAGTTCGCCAAGAAGTACGCCCT
CGGCAATCCCATTGCCGGTAACCTCTACCAGGCTGAGTACGACGACTATG
TGCCCATCCTCTACAAGCAGCTGGGCGCTGCAAGCTTTCTAGACCAT
FMO02072.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6180-RA | 1020 | CG6180-RA | 111..881 | 9..779 | 3855 | 100 | Plus |
| CG10298-RA | 745 | CG10298-RA | 255..438 | 411..594 | 275 | 77.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12707771..12708541 | 9..779 | 3855 | 100 | Plus |
| 3R | 32079331 | 3R | 6343309..6343492 | 411..594 | 275 | 76.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:10 has no hits.
FMO02072.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:05:52 Download gff for
FMO02072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6180-RA | 108..890 | 2..791 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:51 Download gff for
FMO02072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6180-RA | 108..890 | 2..791 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:16 Download gff for
FMO02072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6180-RA | 108..890 | 2..791 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:16 Download gff for
FMO02072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12707768..12708550 | 2..791 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:51 Download gff for
FMO02072.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12707768..12708550 | 2..791 | 98 | | Plus |
