Clone FMO02075 Report

Search the DGRC for FMO02075

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:20
Well:75
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13130-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02075.5prime Sequence

374 bp (374 high quality bases) assembled on 2008-05-06

> FMO02075.5prime
CAGTCGACATGATGATGATGATGATGGTTGCGACGATGAGAATGAGGATG
ATGATGATGATGATGGGGAACACAGGCAGCTGGGCCTGGGAGCAGCTTTC
ATTGAAAGCATTTCCCTTTTTCGACACATTAATGAAATGTAAAATAATCT
GCCCGAATGGGCAAAAACTTTCATTAGATGAGTTGGGCATGCCACTTTTG
TGGTTAACTCGGTGTATTAAAATAAAACTGATTTCGATCCCAGGACCATC
ACACTGGAATTCGCCAAGGGAAAATTATAGTTATGATATAGTTGCTATAA
TAGTTAGTATATATAAAATTATACATATTTTATTCCCGAACATATCGATA
ATAAGAGCAAGCTTTCTAGACCAT

FMO02075.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:16:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9983701..9984048 356..9 1740 100 Minus
Blast to na_te.dros performed 2014-11-28 22:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\Vege 884 Dwil\Vege VEGE 884bp Derived from AF518730. 622..708 358..271 121 64 Minus

FMO02075.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:08 Download gff for FMO02075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13130-RA 370..720 9..360 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:50 Download gff for FMO02075.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13130-RA 456..806 9..360 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:41 Download gff for FMO02075.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9983698..9984048 9..360 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:41 Download gff for FMO02075.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9983698..9984048 9..360 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:50 Download gff for FMO02075.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9983698..9984048 9..360 99   Minus