FMO02078.5prime Sequence
503 bp (503 high quality bases) assembled on 2008-05-06
> FMO02078.5prime
CAGTCGACATGGAGCACGAGTACTACAGCGGTCTGTCGCTCGGTATCATG
GCCATCATTGCTGTCAAGAAGCTCGGCCCGGTCATCGCCAAGTGGGCTGA
TGGCGAGATCGATAAAATCGAATCTGAGTGGAAGGAGGGACGCGAGGCTG
AGCTGAAGGTCCTCTCCGACGCCATCGAGGCCGAGAAGAAGGAGCAGTGG
CGCGCCGACGGTGCCCTGCTGCTGATGGAAGCCAAGAAGGAGAACATTGC
ATTGCAGCTGGAGGCCGCGTTCCGTGAGCGCGCCATGAATGTGTACTCGG
AGGTGAAGCGTCGTCTCGACTACCAGGTGGAGTGCCGCCACGTCGAGCGT
CGCCTTAGCCAGAAGCACATGGTCAACTGGATCACCACCAATGTGTTGGC
CAGCATCTCTCCCCAGCAGGAGAAGGAGACTCTCAACAAGTGCATCGCCG
ATCTGAGCGCTCTGGCACTGCGCGTCAAGTCTGCCGCAAGCTTTCTAGAC
CAT
FMO02078.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ATPsyn-b-RA | 918 | CG8189-RA | 321..798 | 8..485 | 2390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9730733..9731104 | 114..485 | 1860 | 100 | Plus |
| 3L | 28110227 | 3L | 9730535..9730640 | 8..113 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:19:04 has no hits.
FMO02078.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:11 Download gff for
FMO02078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8189-RB | 553..1039 | 1..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:05 Download gff for
FMO02078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-b-RA | 315..801 | 1..489 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:53 Download gff for
FMO02078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ATPsyn-b-RA | 315..801 | 1..489 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:53 Download gff for
FMO02078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9730529..9730640 | 1..113 | 96 | -> | Plus |
| 3L | 9730733..9731107 | 114..489 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:05 Download gff for
FMO02078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9723629..9723740 | 1..113 | 96 | -> | Plus |
| arm_3L | 9723833..9724207 | 114..489 | 99 | | Plus |
