FMO02079.5prime Sequence
1200 bp (1019 high quality bases) assembled on 2008-05-06
> FMO02079.5prime
CAGTCGACATGGGAGACAGTTCAGATGAGGAATATCTGGGCACGGACTGG
CTGGCTTACAGCGAACGCTCCGACTGGGAAGATGTGCAACCGCTCGCCCA
GGACGACGGTCCCAATCCGGTGGTGTCCATTGCTTACAGTCAAAAGTTTC
GCGAGGTCTTCGACTACATGAGGGCCATAATTGCGCGGGGGGAGAAGAGC
CAACGTGCCTTGGACCTAACCACGGACGCACTGCGTCTGAATCCGGCTAA
CTACACGGTCTGGCAATACAGACGCGACGTTCTGCGCGAACTAAAGGCTG
ATCTGTATGCGGAACTGGACTATCTGACCGAGGTGATTGGCCAGAACTCG
AAAAACTACCAGGTTTGGCACCACCGTCGCGTCATCGTCGAGATGCTGAA
CGATCCCAGCAACGAGCTGGAGCTTACTGAGAACGCCCTGGTCAACGATG
GCGATGCCAAGAACTACCACGCCTGGCAACATCGCCAGTGGGCCATTCGC
AGCTTTAATCTCTATGACGATGAACTTAGCTTTGTGGATCGTCTCATTAG
CGAGGATCAGCGCAACAATTCGGCCTGGAACCAGCGCTTCTTTGTGATCA
AGCATTTTGGATTCACGCCGGAGCTGATCCAGCGCGAACTGTCGTACACG
ATGAATCGCATTCGCATCATCAAAAACAACGAGAGTGCCTGGAACTATTT
GGTGGGCGTGATGCGGCAGGGCGACAGTGGAAATGCCCTGCTGAGCAGCT
ACCCGGATGTCGTGGACTTTGTGGAGGAGCTCTACCAGGCTGGCAATCGA
TCGCCCTACCTGCTGGCCTTCCTCATCGATCTCTACCAGGAGCAGGCGCT
CCAACTAAAGGGCAGCGATAGCGATCAACTCGCCCGCAAGGTGTACGGTC
TGTGCGAGGACATGGCCCCAAACACGATGTGATTCGTCGCAAGTACTGGC
AGTATGTGGCACCATCTGAGAACCAGCTAGCACGGTCGAACAGAGCAGCT
TTCTAGACCATTCGTTTGGCGGCGCGGCCCAGGTAGGTGTCATATCATAA
TCATATCATATCAATAATCCCACTAGCTAAGGAGATTCTGGTCATGACTA
TGTGCTGAATTCCTCACAATAAAACGCCCCGCGGCACGACGTCGACATTC
CTATGGATCTGAGCATACTGGGATTCTATCCACGAAGTCCACAGCTAAGG
FMO02079.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fnta-RB | 1352 | CG2976-RB | 87..1077 | 9..994 | 4825 | 99.4 | Plus |
| Fnta-RA | 1185 | CG2976-RA | 87..1077 | 9..994 | 4825 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4829489..4829984 | 994..504 | 2235 | 98.6 | Minus |
| 2L | 23513712 | 2L | 4830040..4830400 | 508..148 | 1805 | 100 | Minus |
| 2L | 23513712 | 2L | 4830469..4830607 | 147..9 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:41 has no hits.
FMO02079.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:12 Download gff for
FMO02079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2976-RA | 59..1060 | 1..999 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:34 Download gff for
FMO02079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2976-RA | 82..1083 | 1..999 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:06 Download gff for
FMO02079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fnta-RA | 82..1083 | 1..999 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:06 Download gff for
FMO02079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4829489..4829979 | 509..994 | 98 | <- | Minus |
| 2L | 4830040..4830400 | 148..508 | 100 | <- | Minus |
| 2L | 4830469..4830611 | 1..147 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:34 Download gff for
FMO02079.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4829489..4829979 | 509..994 | 98 | <- | Minus |
| arm_2L | 4830040..4830400 | 148..508 | 100 | <- | Minus |
| arm_2L | 4830469..4830611 | 1..147 | 97 | | Minus |
