FMO02086.5prime Sequence
1225 bp (993 high quality bases) assembled on 2008-05-06
> FMO02086.5prime
CAGTCGACATGACAACTGGAAGCGATGCTGACGGGGATGGTGACCACCAG
GGCAACAATGACATCGTCCCAAATCCAGAACATCCTCCGGAGATAATAGA
CATCTTCAAATCCTTGGCCGAAAACAATCAAATCGTCTTTAAGTCGCAGC
AAATTGATGATCCGGAAATTCCGGTCGAAGAGAAGCAACAAATAGCACGA
GATGCCTTCGATAAGAACCGTGAGAACTTTCTCATCCGATTTGGAGGCTT
CCTGAATGTAAGACAACTGGGTTCCTTCCAGGAACTGGCTGTCAAGGAAC
CCATTAAAGCAGATGAAAATCTGGAGGAGATGTGCCTGCTGCTAGAGGAT
TTTAGGAGGAAACTCAACACTCGTGCGGTATCCATTAAAAACCGAAGATA
CCATGCCATGCAGCAGCTCCTTGACAAGGGAGAATACTTTAGCGAACACG
AGATGATGCAAAGGGCGCCGGATCTCTACCAGGAGCTAGTGGGTCAGTAC
CTAACGGAGGCGGAAAAGAAGGCTCGGGATAGTTACGATGTTCGGAATAC
TAGCTTCTCAGGAATACTAATGCATACGTTGGAGAAAAAGCAAAGAGATG
AATTACTAGAGGAAACGCAGCAGGAAGGAAAGCAGAGCGTGCAGGTCACA
AGTGAATCCAATCCTCAGGCAGACTGTGACGTTCCTGTCGCTTGCCGAAA
GCAGTGGGGTGGATTTGAAGATGATGAACCAGTGGCCTGTTCAACGAGTC
GAAATGCGGAAGTCCGAGCTCCAATGAATACAACTATGATCTCCACACCG
GAGTTCTATAATCCTGGAGAGCGAAGAACTACTACGCATGAGTTCTTGAG
TATGATGAAGGGAACGCTTTTCTTAGTGGCGAAACAGGATTTTGATATAA
GGCCGTAGATGATAACCTTTGCTGGATGATCTGAGCAATTGAGCAGGATG
AAAACATGCCTTACTTTGAGGATACCGAGGACGAGGAGGAATTGGAGGAA
GCATGCTGCGATGAATGCTTTATCTAGGCGAAGATGACTTGGATATTCAC
TTGAGCATCTAGCATCATCCCGCTCTCAGAATTGTCACGGGAGCAAGCTT
CTATGATCATTTCGTTGGGCGCGGGCCAGGTAAGTGGCCTCAAAACCTTA
ATCTATACCTAATCTATCCACATAGTCTAGGAAACTCTGATCTGAACATA
GGGCTGTTAATTCTCACCAGTAATA
FMO02086.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7810-RA | 1320 | CG7810-RA | 73..1163 | 9..1090 | 4820 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8310081..8311123 | 1046..9 | 4405 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:45 has no hits.
FMO02086.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:20 Download gff for
FMO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7810-RA | 22..1084 | 9..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:47 Download gff for
FMO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7810-RA | 73..1135 | 9..1064 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:56 Download gff for
FMO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7810-RA | 73..1135 | 9..1064 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:56 Download gff for
FMO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8310081..8311123 | 9..1046 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:47 Download gff for
FMO02086.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8310081..8311123 | 9..1046 | 98 | | Minus |
