FMO02089.5prime Sequence
659 bp (469 high quality bases) assembled on 2008-05-06
> FMO02089.5prime
CAATCGACATGTTTCGAGTGCATTGCAACGAGTGTTTCCGTCATCGCAAA
ACTGATCCAGCCGTGCCCTTCCACTTGACCCAGTGCCGGCACGTGATCTG
CGGCCCCTGTTTGGGCCAATCCTCGCTAGAAAAGAACTGCCCGCTATGCG
GCCAGGTGCTCAAAGCGATCCAGATCAACCGGGATATGCCAACTAGCGTG
GCCAACTACTTCGCGGATCCCCTGCGATTCCAGCAGATCTACCGCAAGAT
CTCCAAGTTCCAAGCGGACCAGCAAGCATCGGACAACCTGGGTTTCTACC
GTCAGTTGCAGCAGCTGGAGCAAAACAAGCGCCAGCTGGAGGGCTTTTGC
AAGATGGAGGCGCAGCTGAACCAGAAGGTCGTGGAGGAAAAGAAGCGAAT
CGCTGAATTGCGCACCTACATCGCTTACCACGAGAATGCGCATAGGATGA
CGAGGCGCCGGCACAGTGCAGGTGAGAGAATCCATACGCCGGAGTTCAAG
GAGGCCTGGAACACCTCTATCAGCACTTCGGACAAATCGCCGTCGGATAT
GCCTTCTGATAGCTCCCGCCGGTCCGCGGACTTGGATACGCAGTCAACGC
GGAGAAGATCTTTTGGCAGCGACACTAAAGGCTTTCGTCTTGCAAGCTTT
CTAGACCAT
FMO02089.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12200-RA | 993 | CG12200-RA | 105..737 | 9..641 | 3090 | 99.2 | Plus |
| CG31053-RA | 818 | CG31053-RA | 78..431 | 68..421 | 510 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19475167..19475799 | 9..641 | 3090 | 99.2 | Plus |
| 3R | 32079331 | 3R | 27927744..27928097 | 421..68 | 510 | 76.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:58:51 has no hits.
FMO02089.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:23 Download gff for
FMO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12200-RA | 36..673 | 4..641 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:57:50 Download gff for
FMO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12200-RA | 100..737 | 4..641 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:42 Download gff for
FMO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12200-RA | 100..737 | 4..641 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:42 Download gff for
FMO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19475162..19475799 | 4..641 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:57:50 Download gff for
FMO02089.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19369195..19369832 | 4..641 | 98 | | Plus |
