FMO02091.5prime Sequence
962 bp (935 high quality bases) assembled on 2008-05-06
> FMO02091.5prime
CAGTCGACATGACCACCACGGAGAACGTGTCCACGGAGCGCAAAGCGAAT
CCAGTGAAGTCCTTCCTGACCGGCGGATTCGGTGGGATCTGCAATGTGCT
CTCTGGCCATCCGCTGGACACCATCAAGGTGCGCCTGCAGACCATGCCGC
GTCCGGCGCCGGGTGAGCAGCCTCTGTACCGCGGCACCTTCGACTGTGCG
GCCAAGACGATCAAAAATGAGGGCGTCCGCGGTCTGTACAAGGGCATGTC
CGCACCGTTGACGGGCGTTGCTCCGATCTTTGCGATGTGCTTCGCCGGCT
ATGCGCTGGGCAAGCGGCTGCAGCAGCGCGGCGAGGACGCCAAGCTGACC
TACCCGCAAATCTTCGTGGCCGGCTCCTTCTCCGGCCTGTTCTCCACCCT
GATAATGGCACCCGGCGAGCGCATCAAGGTGCTCCTGCAGACGCAGCAGG
GTCAGGGTGGCGAGCGCAAGTACAACGGCATGATCGACTGCGCCGGCAAG
CTATACAAGGAGGGTGGACTTCGCAGCGTTTTCAAGGGCAGCTGCGCCAC
AATGCTCAGGGATTTGCCCGCCAACGGGCTGTATTTCCTGGTCTACGAGG
CGCTGCAGGATGTGGCCAAGTCGAAGTCAGAGACGGGACAAATCAGTACT
GCCTCAACGATTTTCGCAGTGGAGTGGCGGGCATGGCCTACTGGATTCTG
GGCATGCCAGCCGACGTGTTAAAGAGCCGCCTACATCGGCTCCCGATGCA
CCTACAACACGGCATACGCAGTGTCTTCAAGGATCTGATTGTCAGGATGG
ACCTCTGGCCTTGTACCGCGGCGTAACGCCCATCATGCTCCGAGCCTTCC
AGCCACGCTGCTGCTTCTTCGGCATTGAGCTGGCTAACAATTCTTTACAT
CGTAGCTTCAAATTTCGCAAGCTTTCTAAACCATTCGGTTTGGCGCGCGG
GCCAGGTAGTGT
FMO02091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| colt-RD | 1449 | CG3057-RD | 501..1419 | 8..916 | 4255 | 98.3 | Plus |
| colt-RA | 1480 | CG3057-RA | 504..1422 | 8..916 | 4255 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2768648..2769566 | 916..8 | 4005 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:48 has no hits.
FMO02091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:26 Download gff for
FMO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3057-RB | 494..1425 | 1..925 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:49 Download gff for
FMO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| colt-RA | 497..1428 | 1..925 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:57 Download gff for
FMO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| colt-RA | 497..1428 | 1..925 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:57 Download gff for
FMO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2768642..2769573 | 1..925 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:49 Download gff for
FMO02091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2768642..2769573 | 1..925 | 97 | | Minus |
