FMO02092.5prime Sequence
1182 bp (977 high quality bases) assembled on 2008-05-06
> FMO02092.5prime
CAGTCGACATGAATGGACCAAGCCTCCTCGTAAAGTTGACCACACGTGCC
TTCCTGTTATTCAACGGTCGCCCCCAGAATCGCTGGCTAAAGTCGATGGC
CAATAGTATGGTTTGCTCGCGAGGCGTCTCTCCAGAATTGATTGCCCAGC
TGGGAAAACCACCTAGGATGCGCACAAACCCGGCATTCCGGAAGGTGGCA
ACTCCTGAGTTCAAAAGCATATTTACCCCCGAGCTGAATGACCTTGTGGC
GCTCTTTAAGAAGTACGACTACGAGCTGCGGATCGCCGGCGGAGCTGTGC
GCGACATTCTGATGGGCATTCCACCGAAGGACATCGACTTGGCCACCACC
GCCACTCCGGATCAGATGAAGCAGATGTTTGAGAAGGAGGAGGTGCGAAT
GATAAACGCAAACGGCGAAAAGCACGGCACCATCACTCCTAGAATCAATG
ACAAGGAGAACTTCGAGGTGACCACATTACGCATCGACATCCGCACCGAT
GGACGCCATGCGGAGGTGATGTACACGACTGACTGGCAACTGGATGCGAA
CCGCCGCGATTTGACAATCAACTCTATGTTCTTAGGCTTTGATGGCACCG
TGTACGATTACTTCTATGGCTACGATGATCTCCAGGAGCGTCGCGTGGTC
TTCGTGGGCGAAGCAGATATTCGCATTAAGGAGGATTTTCTGCGCATCCT
GCGCTATTTCCGATTCTACGGACGCATCGCAAGTGAGGAAAACAACCACG
ATAAGGCCACCCTGGCAGCCATAAAGGAAAACGCGAAAGGTCTTGCGAGA
ATAAGTGGCGAGCGGATCTGGTCTGAGCTCCAAAAGATAGTGCCGGGAAA
TTTCGGAGCCGCATTGTTTCTGGAGATGCACCGTTGTAACCTATTCGAGT
ACATTGGGCTGCCTAAAGAGCCATATCTGGATGAGTTCGAACGGGCTTTG
GCAAGCGCCTAGATCAATTTGAAAAGCACATCAGCCGATTTTTGTACTGG
CAGATGCTGCACTCCGTGAAGACGCGCATTGCAATGCCAACGCTGAAGCT
ATCCGCTACAACGAACTGGCTAGTCATTAACCCAGGGAGCGGGAAGGTGG
CTCCAGTAACGAACTGCGTGCACGAGTTGCTACAAGGTACGTCAAGGAAT
TTCGCACAACGTTGCTGGAATATCTCTCTGGA
FMO02092.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2100-RB | 1597 | CG2100-RB | 98..1225 | 7..1120 | 4960 | 97.2 | Plus |
| CG2100-RA | 1586 | CG2100-RA | 98..1225 | 7..1120 | 4960 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5735274..5736258 | 992..7 | 4740 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:07:52 has no hits.
FMO02092.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:27 Download gff for
FMO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 133..1213 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:51 Download gff for
FMO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 92..1172 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:59 Download gff for
FMO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2100-RA | 92..1172 | 1..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:59 Download gff for
FMO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5735184..5736261 | 1..1073 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:51 Download gff for
FMO02092.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1560906..1561983 | 1..1073 | 97 | | Minus |
