FMO02093.5prime Sequence
1207 bp (953 high quality bases) assembled on 2008-05-06
> FMO02093.5prime
CAGTCGACATGAACAGCGACGGCGAAGCCTCATCACTGCAGATGCCCCAG
GTGACGGTGGGTGGCATGCTGCCGGTAGAAGCCAACCAATCGCCTGAAAC
CGCTCCGCTTTCGATGGCGGAGACGGTGTCCAACACGGACTTCTACATCG
GCGTTGGCCTGGCTATCTCCTCCTGCTTCTTCATCGGTTCCAGCTTCATC
ATCAAAAAGAAGGCACTCATTCGGCTGAGCAGGTACGGCGAGGTGCGGGC
GTCAGCTGGAGGATTTGGATATCTGAGGGAGTGGATCTGGTGGGCGGGCC
TTCTGACAATGGGTGTGGGAGAAGCGGCCAACTTTGCGGCCTACGCCTTT
GCCCCCGCTTCATTGGTCACTCCGTTAGGCGCGCTGAGTGTTATCATCTC
AGCCGTGATGGCCTCCAGATTCCTCAACGAGAAGCTAAACTTGCTGGGGA
AGATCGGCTGCTTTCTGTGCATACTGGGATCCACCATCATTGTGATTCAC
TCGCCCAAAGAGAAGGAGATCGAGGATTTGCAGCTGCTATTCGATATGCT
TTTGGATCCGGTTTTCATTCTATACGTGATCTGCATCGTCGGTTCCACGG
TGTTTGTGGCCTGCTTCATTGCACCACGGCATGGGCACACCAATGTGGTA
GTTTATATCTTCTTGTGCTCCGGCATCGGATCTCTGACTGTGATGTCCTG
CAAGGCATTGGGCCTAGCCATACGGCAGACGCTGAATAACGGAGCAACGT
CTTCCTCACATGGATGCCATGGTTCCTGATCCTGGTCACCGTCACTTTCA
TAGCCATCCAGATGAACTATCTGAACAGGCGCTGGATATATTCAATACTA
GTATAGTTACTCCAGTGTACTATGTAATGTTCACCACCCTGTGATAGCTG
CGTCTGCCATCCTCTTCAAGGAGTTCACCCACCATGCGGTTCGATGATAT
CTCGGCGATGTGTGCGGCTTCCTGATCGTTATCAAAGCTGTGTCCTGCTC
ACGCGTTCGAGATATTGATTATCGCCTGACGATGTACTTGACTGATGCAC
CGAAATGCATCGGGTGTTCCAAGTTCGACAGAGAGGTGCTGTCCACCGCC
ATATACAAGAACGCTCCCTGTTCTTTACGATCCCACGCAACTCTCCGAGC
CAAGGCTTCAAGAACTTGCTTTGGGCGCGCGGGCCAGGCTAAGTGCTTAA
ACTACGT
FMO02093.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spict-RB | 1461 | CG12292-RB | 68..1159 | 9..1091 | 4905 | 97.5 | Plus |
| spict-RA | 1461 | CG12292-RA | 68..1159 | 9..1091 | 4905 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12705582..12706277 | 301..993 | 3160 | 98.6 | Plus |
| 2L | 23513712 | 2L | 12704792..12705092 | 9..309 | 1460 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:19:35 has no hits.
FMO02093.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:28 Download gff for
FMO02093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12292-RA | 65..1149 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:18 Download gff for
FMO02093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spict-RA | 63..1147 | 1..1079 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:14 Download gff for
FMO02093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spict-RA | 63..1147 | 1..1079 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:14 Download gff for
FMO02093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12704787..12705092 | 1..309 | 97 | -> | Plus |
| 2L | 12705591..12706277 | 310..993 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:18 Download gff for
FMO02093.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12704787..12705092 | 1..309 | 97 | -> | Plus |
| arm_2L | 12705591..12706277 | 310..993 | 98 | == | Plus |
