FMO02101.5prime Sequence
972 bp (972 high quality bases) assembled on 2008-05-06
> FMO02101.5prime
CAGTCGACATGATGTCTGCCTTGTGCCCCGAGGCAATGAATGATGCGGAT
CGTCTGGTGGAAAATCTGCGCCATGTGCCGGTCCGCCTGCCCAGGGAGTT
GGAGGTTCGCCAGCTGTGCCGCTCGTTGAGTGACTTGCTCGTCGGCGAGT
CGAATCTACTGAGCCTGCAGAGTCCGCAGATCGTATGCGGTGACATTCAC
GGTCAGTTCGAGGATCTGCTCCACCTGCTGGAATTGGGCGGTTCGGTGCA
GGAGCATCGCTACTTGTTCCTGGGTGACCTGGTGGATCGGGGCAAGAACA
GCGTGGAGACCTTTCTTCTGCTAGCTGCTCTCAAGGTGCGACATCCGGCA
CAAGTTAGCCTGCTACGGGGCAATCATGAGTGCCGCAGTGCCACTCGATC
CTATGGATTCTACGAGGAGTGCCTTTCGCGGTACGGCTCTGCGAATGTCT
GGAGGATGTGCTGCCGTGTCTTCGATCTCTTGCCGCTGGCGGCTATCATT
GATGGCAATATATTGTGTGTTCATGGCGGCCTGTCGCCGGATATGCAACG
ATTGGATGACTTACGTAGCCTGGATCGCTGCCACGAGATACCCGAAAGTG
GAATTATAGCTGATCTTCTCTGGAGCGATCCACAGGAAGCGCCTGGATGG
GCGGCATCGCCACGAGGACATGGAAAACTCTTCGGTGGCGATGTTGTTGA
GGAGTTTACGCGCGCAAATGGAATCTCTCTCATATGCCGCGCTCATCAGT
TGGCCCAGGATGGCTTCCGTTGGCATTTTGGCCAACTTCTTGTTACCATA
TGGTCAGCACCCAACTATTGCTATCGCTGCGGCAACAAAGCGGCTATTCT
GCGCTTAAATGCTGCTGGCGATTATGATTTTAAAGTGTTCGAAGCGCAGC
GCTGCACTCCAACCGCAGCCAAGAAACCGAAAAAGCGTTGTCGTCATTTT
TTCAGCAAGCTTTCTAGACCAT
FMO02101.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11597-RC | 1806 | CG11597-RC | 712..1661 | 9..954 | 4650 | 99.6 | Plus |
| CG11597-RB | 1686 | CG11597-RB | 592..1541 | 9..954 | 4650 | 99.6 | Plus |
| CG11597-RA | 1449 | CG11597-RA | 355..1304 | 9..954 | 4650 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11820486..11821432 | 952..9 | 4570 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:54:36 has no hits.
FMO02101.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:33 Download gff for
FMO02101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11597-RB | 566..1530 | 1..963 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:50 Download gff for
FMO02101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11597-RA | 329..1293 | 1..963 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:04 Download gff for
FMO02101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11597-RA | 347..1311 | 1..963 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:04 Download gff for
FMO02101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11820476..11821438 | 1..963 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:50 Download gff for
FMO02101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11813576..11814538 | 1..963 | 98 | | Minus |
