FMO02104.5prime Sequence
968 bp (968 high quality bases) assembled on 2008-05-06
> FMO02104.5prime
CAGTCGACATGTCCAATAAAATCAACCCGAAGCGCCGCGAACCGACAGCA
GCAGCAGCAGGAGCCGGTGCCACGGGAGTGGCCACCAACACGAGCACCTC
GACCGGATCCTCCAGTGCCGGCAACACGTCCTCGGCCAACACATCCTCGT
CGTCCAGCTCCTCGCTGTCGTCCGCCGGTGGCGGTGATGCGGGCATGTCC
GCCGACTTGACCTCGCTGTTTGAATGCCCCGTGTGCTTTGACTATGTGCT
ACCGCCGATCCTGCAGTGCTCCAGCGGGCACCTGGTGTGCGTGTCCTGTC
GCTCCAAGCTCACCTGCTGCCCCACCTGCCGCGGTCCGCTGGCGAATATC
CGCAACCTGGCGATGGAGAAGGTTGCCTCGAACGTCAAGTTCCCGTGCAA
GCACTCCGGCTACGGATGCACCGCCTCGCTGGTTTACACGGAAAAGACAG
AACACGAGGAGACGTGCGAGTGCCGGCCCTACCTGTGTCCGTGCCCGGGC
GCCAGCTGTAAGTGGCAGGGCCCGCTTGACCTAGTCATGCAGCATCTGAT
GATGTCGCACAAGAGCATCACAACGCTGCAGGGCGAGGACATCGTGTTCC
TGGCCACCGACATCAACCTGCCCGGCGCCGTCGATTGGGTAATGATGCAG
TCCTGCTTCGGCCACCATTTTATGCTCGTGCTGGAGAAGCAGGAGAAGTA
CGACGGACACCAGCAGTTCTTTGCCATCGTTCAGCTGATCGGGTCGCGCA
AGGAAGCGGAGAACTTTGTCTATCGCCTGTAGTTGAACGGAAACCGACGC
CGGCTCACCTGGGAGGCAATGCCGCGTTCGATCCACGAGGGCGTCGCTTC
CGCAATTCACAACTCGGACTGCCTGGTGTTCGACACGTCGATTGCGCAAT
TGTTCGCCGACAATGGCAACCTGAGCATTAACGTGACCATATCTCTGGTC
GCAAGCTTTCAAGACCAT
FMO02104.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sina-RC | 3124 | CG9949-RC | 830..1771 | 9..950 | 4680 | 99.8 | Plus |
sina-RB | 2482 | CG9949-RB | 188..1129 | 9..950 | 4680 | 99.8 | Plus |
sina-RA | 3191 | CG9949-RA | 897..1838 | 9..950 | 4680 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16856418..16857359 | 9..950 | 4680 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 22:48:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 613..728 | 121..8 | 133 | 63 | Minus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 973..1033 | 41..98 | 126 | 72.1 | Plus |
FMO02104.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:36 Download gff for
FMO02104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9949-RB | 181..1132 | 1..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:49 Download gff for
FMO02104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sina-RA | 890..1841 | 1..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:46 Download gff for
FMO02104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sina-RA | 890..1841 | 1..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:46 Download gff for
FMO02104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16856411..16857362 | 1..954 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:49 Download gff for
FMO02104.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16849511..16850462 | 1..954 | 99 | | Plus |