FMO02109.5prime Sequence
1191 bp (993 high quality bases) assembled on 2008-05-06
> FMO02109.5prime
CAGTCGACATGTGGCCGCGATTTGGCATTAAGATTGGCAACAGCACGCTT
TGCATCGCCCATGTGCGCGCGGATGGCAAGGCGGAGGTGATCGCCAACAA
ACAGGGCGACCGAGTGTCCCAAGCGTGCCTTCTCTGGGACGGAGCCTCGG
AGATCGAATGTGGCCTCACGGCCAAGCAGAAGATGGCCAACCGTCCGCGC
CAGGCGGTGGCGCACAGCTTTCAGTTGCTTCAGCCCAAGGAAGAGCTCAC
GGAGGAGAAACTGTCCAGTGCGCTGCGTGAAATACCCTGCGACTTTGACA
AGGAGGAGCTGGTGTTCCGGATGGAGCACACTGTACCCTCCGACAGGGAG
GACCAAGACGATAGAGTTGTGACCAAGGACCTCAGCGCCTATCAGGTGAC
GGTGGAGCTGCTGCGCGCTGAGCTGGAGCTGGCCCATCAATATCACACGG
ACGGGGAGCAGGCGCCCATTGCCGTGCTATCCATACCCAGCTACTATCCC
GCCTCGGCCTACAAACTGCTAGCAGATGCCGCTCAAACCGCTGGCTTCCA
TGTGGCCCAGATTATAACCGAACCCACGGCCGCCGTTCTAGGCTATAGCA
TCGGCGAGGAGCAGACGGAACAGCGCCGCCATGTGCTGACAATCAAATGC
GGTGGCTTATATAGCGACATCGCATTCTACTCCGTCCAAAATGGCCTGTT
CGTTCAGCTGGCCACTTTCGGACCCTTCCCCATCGGTGGCCGGCAATTCA
CCGAGGCCTTGGTGCAGTTTATTTGCGAGGAGTTCCGTCGCAAGTACAAG
CTAGATCCGCATGAGTCTCGCCGCTCAGTGGCCAAAATACGCACTGCCGC
CGCCAATTGCAAACACATCCTGACCACGATGCCTTCCACGCACTTTATAT
CGACTCCCTGATGACGGCGTTGATTACATGCCCAGATGTCGCGTGCTCGC
TTCGAGAGCTCCATACAGCCAGTGATCATATCTCATCAGCAGCTAGCGGT
GTGTGGAGCAGCGCAAAGAGCATCCGGGTTGAGTAAATAGATGACTTCGT
CTACTAGCGCCAATGCATTCCCAAGCTTCAGGCGCATGGGAGCCCGCTCC
GTATGCTAGCTCCACACAGTCATTCGCGCAAGTTGGCATCGCTGCCGCCA
GCTGTGTACTGTGTTGACCTCTTCGAAAGAACGATCTATCT
FMO02109.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7182-RB | 1962 | CG7182-RB | 314..1456 | 9..1126 | 5010 | 97.1 | Plus |
| CG7182-RA | 1786 | CG7182-RA | 138..1280 | 9..1126 | 5010 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8345097..8346069 | 978..9 | 4685 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:20:17 has no hits.
FMO02109.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:41 Download gff for
FMO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 262..1393 | 9..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:57 Download gff for
FMO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 138..1269 | 9..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:36 Download gff for
FMO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7182-RA | 138..1269 | 9..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:36 Download gff for
FMO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8344938..8346069 | 9..1116 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:57 Download gff for
FMO02109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8338038..8339169 | 9..1116 | 97 | | Minus |
