FMO02110.5prime Sequence
1223 bp (1014 high quality bases) assembled on 2008-05-06
> FMO02110.5prime
CAGTCGACATGAAGATCCGAACCAGGAGGAGTCTTTCCTTTTCCGGCTGT
GGCTTCTTGGGCATCTATCACGTGGGCGTGGCCGTCTGCCTACGCCAACA
CGCCCCCCAACTTTTGCTGGAGAGGATTGCCGGTGCATCCGCCGGTGCCT
TGGCCGCCTGCTGTCTCATCTGTGATCTTCCGCTGGAATGCATGGCCGGG
GATTTCCTGCGAGTTGTCCAGGAGATACAACGGCATTCGTTGGGCGCCTT
CAGTCCGTGGTTCAATTTGCCGGAGTGCCTTCTCGAGGGCATGCGAAGTT
GGTTGCCCGAGGACGCCCATCTACTGGCCAGCGGACGACTTCATATTTCC
CTTACCCGCGTCAGCGATCGCCGCAATGTGGTAATGTCGGAGTTCAGCTC
CCGGCAGGAGCTACTCCAGGCCCTCATGTGCTCCTGCTTCATTCCCGGAC
TGTCTGGATTGGTGCCTCCACAGGTCCGAGGAGTTCGCTATATGGATGGG
GCCTTTTCCGATAATCTACCGCTGCTGGACGAGCACACCGTCACCGTAAG
TCCATTCTGCGGGGAGAGCGACATATGCCCACGGGATCAGAACCCCCATC
TGCTTCAGCTGAACATCAATTGGGCGAACACTTGCATCCGATTGTCCAGG
CGGAATCTGCGTCGCATGGTGCGCATCTTGGTGCCGGGCAGGGCGGATTT
CATGGCCAATTTCTGTCAGCAGGGCTACGATGATACGCTCCAATTTCTGC
GCAGGAATAGCCTACTCAATGAGGGTTTCAAGATCCAGGAGAAGGGCATG
ATCAGTTGGATCCATCAGCAGATGGAGAGGCAGAAGGAGCTGCGGGAGAC
CCCAAGGGATCTTGAGAAGGTGCCACACAAATCGCATGACTACAAACAAT
GTGCAGCACAAGAAGCGAAGGATTCGAAAACGAGGACCTCAAAGACAAAC
TCTGCAGAAGACCAGAAAACCAGCAGGAAAAGATCAGGAACGGAAGGAGT
TTAGAAATGAAATCAGAATCCAGAAAAGAATCCACCAGAAAGCTCAACAG
CAGCGTTGAAATTCTGAACCCGATCGCAAGAAACGTCTGGAAAATTAGTC
ACCGAAGAACCCAATCCATTGGCAGCTCACTCATGCCTCCACTTGATCGT
CCTCGACTGGATAAGGTCGCCTCGCCGCCTGCAGACACGAGTCCAAGATG
ATCGCTCCCGCGCACATTCTCAC
FMO02110.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dob-RA | 1855 | CG5560-RA | 187..1335 | 9..1149 | 5065 | 96.8 | Plus |
| bmm-RB | 2301 | CG5295-RB | 641..899 | 333..591 | 305 | 75.5 | Plus |
| bmm-RA | 2437 | CG5295-RA | 641..899 | 333..591 | 305 | 75.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15067885..15068514 | 471..1095 | 2495 | 95.2 | Plus |
| X | 23542271 | X | 15067193..15067659 | 9..475 | 2335 | 100 | Plus |
| 3L | 28110227 | 3L | 14778618..14778876 | 591..333 | 290 | 74.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:34:51 has no hits.
FMO02110.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:29 Download gff for
FMO02110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5560-RA | 191..1344 | 9..1153 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:06 Download gff for
FMO02110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dob-RA | 187..1340 | 9..1153 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:07 Download gff for
FMO02110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dob-RA | 187..1340 | 9..1153 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:07 Download gff for
FMO02110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15067193..15067657 | 9..473 | 100 | -> | Plus |
| X | 15067888..15068593 | 474..1166 | 93 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:06 Download gff for
FMO02110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14961226..14961690 | 9..473 | 100 | -> | Plus |
| arm_X | 14961921..14962626 | 474..1166 | 93 | <- | Plus |
