FMO02124.5prime Sequence
1204 bp (994 high quality bases) assembled on 2008-05-06
> FMO02124.5prime
CAGTCGACATGGGTTGTGCCGTGAGTACAGCACGCGATAAGGAGGCCATC
GAGCGGTCGAAGAACATCGATCGCGCCCTGCGGGCGGAGGGCGAGCGGGC
CGCCTCGGAGGTGAAACTGCTGCTGCTGGGAGCCGGAGAGTCGGGCAAGT
CAACGATTGTGAAACAGATGAAGATCATCCATGACACGGGCTACTCGCAG
GAGGAATGCGAGGAGTATCGTCGCGTCGTCTTCAGCAACACGGTGCAGAG
TCTAATGGTGATCATCCGCGCAATGGGACGCCTGAAGATCGAGTTTGCCG
ATCCGAGCCGAACGGACATTGCCCGCCAGTTCTTCACACACGCCTCTGCC
GCCGACGAGGGCATCCTGCTGCCCGAGATCGTGCTCCTGATGAAGAAACT
CTGGGCAGACGGTGGCGTACAGCAGAGCTTCGCCCGATCGCGCGAATATC
AGTTGAATGACTCGGCGGGATACTATCTAAATTCGCTGGATAGGATCGCG
CAACCGAACTACATACCCACGCAGCAGGATGTGCTACGCACGCGGGTGAA
GACCACTGGCATCATCGAGACACACTTCTCCTGCAAGCAGCTGCACTTCA
AACTTTTCGATGTGGGTGGCCAGCGATCGGAGCGCAAAAAGTGGATTCAT
TGCTTCGAGGGCGTTACGGCCATAATCTTCTGCGTCGCGCTATCAGGTTA
CGATCTAGTATTGGCCGAGGACGAAGAGATGAATCGTATGATTGAGTCCC
TGAAGCTGTTCGATTCCATCTGCAACTCCAAGTGGTTTGTGGAAACATCC
ATAATACTGTTCCTCAACAAGAAGGATCTGTTTGAGGAGAAGATCAAGAG
ATCTCCGCTGACGATATGCTTCCCAGAGTACACAGGAACCAACCATCTTC
GAGGAGGCGGCCACTACATTCGCATGAAGTTCGAAACCTGAACCAGCGAA
AGACCAAAAGGAGATATACACGCATCTCACTGCGCACGGATACGACACGT
GAGTTCGTCTTCGATGCCGTCACCGTATGTGATCATCAGACAATCTGAAA
CAAATGGCTTATTTCGCAAGCTTTCTAGACATCGTTTGGCGCGCGCGGCC
CAGGCCACTGCTCTTAATCTAATCCGTAATCATAATCCCTAATCCAACTA
GCTAAGAGATCCGGTCTATGCACTATGGCTCTGCATCTTCCACAGTAGAA
GGCA
FMO02124.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphai-RA | 2067 | CG10060-RA | 407..1470 | 9..1063 | 4975 | 98.6 | Plus |
| Galphao-RJ | 1785 | CG2204-RJ | 263..612 | 537..886 | 440 | 75.4 | Plus |
| Galphao-RI | 5457 | CG2204-RI | 920..1269 | 537..886 | 440 | 75.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:03:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6974002..6974474 | 601..129 | 2365 | 100 | Minus |
| 3L | 28110227 | 3L | 6973589..6973780 | 886..695 | 960 | 100 | Minus |
| 3L | 28110227 | 3L | 6979517..6979638 | 130..9 | 610 | 100 | Minus |
| 3L | 28110227 | 3L | 6973836..6973932 | 698..602 | 485 | 100 | Minus |
| 3L | 28110227 | 3L | 6973356..6973523 | 1055..897 | 320 | 91.7 | Minus |
| 2R | 25286936 | 2R | 10461302..10461444 | 744..886 | 220 | 76.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:03:58 has no hits.
FMO02124.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:06:45 Download gff for
FMO02124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10060-RA | 410..1479 | 4..1063 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:46 Download gff for
FMO02124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 401..1470 | 4..1063 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:27 Download gff for
FMO02124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphai-RA | 401..1470 | 4..1063 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:27 Download gff for
FMO02124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6973590..6973778 | 697..885 | 100 | <- | Minus |
| 3L | 6973838..6973932 | 602..696 | 100 | <- | Minus |
| 3L | 6973347..6973533 | 886..1063 | 92 | <- | Minus |
| 3L | 6974002..6974473 | 130..601 | 100 | <- | Minus |
| 3L | 6979518..6979644 | 4..129 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:46 Download gff for
FMO02124.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6966447..6966633 | 886..1063 | 92 | <- | Minus |
| arm_3L | 6966690..6966878 | 697..885 | 100 | <- | Minus |
| arm_3L | 6966938..6967032 | 602..696 | 100 | <- | Minus |
| arm_3L | 6967102..6967573 | 130..601 | 100 | <- | Minus |
| arm_3L | 6972618..6972744 | 4..129 | 98 | | Minus |
