FMO02125.5prime Sequence
923 bp (923 high quality bases) assembled on 2008-05-06
> FMO02125.5prime
CAGTCGACATGAAGATGGAAGTGCTCTCAGTACAAAATCACATTCAGGGA
AAATTCGGTGTTAATAAAATTAAAGACTGGCAAGCTTCTACGGCGCCGCT
GGAGGAGGAGGAGGAGCTGACCGCAGGCGTGAACGGGAACACAGCCGCCG
GCGAGGGCATTCTGGACGTCGACGTGGTAGATGGCCATCCAGCCTCTGTG
CTCCACATGCGACAGCACCAGGCGCTCAACACCCGCCCATCGGCCACGCC
TCCATCGGCAGGGGGCGGTGGTCCGTTGGCGGGCGGAGGATCCGTCGGTA
TGACCACTCCCAAACAGGCCACGTCGCCGGTGGCCGCGGCCAGTTTTGAG
GCGCCCCTTAGCGGTGGCAGTGCAGCCGCCTATCATCACGCCTACATGAC
CAACGTGCTGTCCAGCACCGCCCAGCAGCACCACCCACTGCCCGCATCGC
CGCTGCAGTCGACCGCCTGCGCTCGGTTTGGGGCCGCCGACAACTTGGAC
GATGTGAGCGCCAGCGCAGTGCGGGAACTGTCGCAGCAACTGCAGGCTCA
GCTACGGGATGCCAAGCGTCGCCACCTGGCCTGTACCGAGGTCACGCTGC
CCAACGACCTCACGCAGCGCATCGCCGCCGAGATCATCCGGATGTCGGAG
CGGGAACCATGCGGCGAGCGGGCCTGCACGCTCTTCATTGAGTTCGAGAG
CGAGCCCAACAAAGTCAAGCGCATTGCATACTTTAAAGTGGATCCGGACA
CGGTGTCCATCTTCGAGCTGTACTTGACATTGAGGCAGGACAAGAGCGGC
TGGAGCTCCTTGGTGCCGCAGTTTATAAAAACCTTACTCGTAGCAATACC
ATCAACATCAGTCCCGACTTCACGCTGACCAAGAAAAAAGCTCTACTCAT
CCGAGGCAAGCTTTCTAGACCAT
FMO02125.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chrb-RC | 5845 | CG7533-RC | 986..1882 | 9..905 | 4440 | 99.8 | Plus |
| chrb-RE | 4908 | CG7533-RE | 114..945 | 74..905 | 4115 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11494088..11494733 | 74..719 | 3230 | 100 | Plus |
| 3L | 28110227 | 3L | 11494846..11494956 | 719..829 | 555 | 100 | Plus |
| 3L | 28110227 | 3L | 11488535..11488601 | 9..75 | 335 | 100 | Plus |
| 3L | 28110227 | 3L | 11495017..11495092 | 829..905 | 335 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:27 has no hits.
FMO02125.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:00 Download gff for
FMO02125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7533-RC | 973..1872 | 4..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:50 Download gff for
FMO02125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrb-RC | 983..1882 | 4..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:05 Download gff for
FMO02125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrb-RC | 983..1882 | 4..905 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:05 Download gff for
FMO02125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11488532..11488601 | 4..75 | 95 | -> | Plus |
| 3L | 11494090..11494732 | 76..718 | 100 | -> | Plus |
| 3L | 11494846..11494956 | 719..828 | 99 | -> | Plus |
| 3L | 11495017..11495092 | 829..905 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:50 Download gff for
FMO02125.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11481632..11481701 | 4..75 | 95 | -> | Plus |
| arm_3L | 11487190..11487832 | 76..718 | 100 | -> | Plus |
| arm_3L | 11487946..11488056 | 719..828 | 99 | -> | Plus |
| arm_3L | 11488117..11488192 | 829..905 | 98 | | Plus |
