FMO02129.5prime Sequence
1201 bp (1028 high quality bases) assembled on 2008-05-06
> FMO02129.5prime
CAGTCGACATGGAGACGCTCCTGGAGCAACAGCGGCGCCTACACGAGGAG
CGCGAGCGCCTGGTCAAACTGATGGTGGACGAGCATGCGACCAAAAAGCC
GGGCGAAAAGGAGCGCATCCATTCGGAGCACCGGCTTAAATACCTCATGG
AACTGCATCACAACTCTACGTCCCAGCTACGCGATCTCTACGAGGACAAG
GACAATGAACGAAAGGCGGAGATTGCCGCTCTTTCGGGGCCCAACGAGTT
CAATGAGTTCTACGCCCGCCTCAAGCAAATCAAGCAGTTCTACAAGTCCC
ATCCGGCGGAGGTCAGCGTGCCGCTGTCCGTCGAGTTCGACGAGATGATT
CGGGTGTACAACAATCCGGACGACATGAGTGCCCTAGTGGAGTTCACTGA
CGAGGAGGGCGGCGGTCGCTATCTGGACCTCAACGAGTGCTACGAGCTGT
ACCTCAACTTGCGGTCGGTGGAGAAACTGGACTATATCACTTACCTTATG
TCCTTTGACCACGTCTTCGATATTCCGAGAGAGCGCAAGAACCGCGAGTA
CCGCATATACATAGAGACCCTCAACGACTACCTGCACCACTTCATCCTCC
GAATCCAGCCCTTGCTCGACCTGGAGGGCGAACTGCTAAAGGTGGAACTT
GACTTCCAGCGCCAGTGGCTGATGGGCACATTTCCGGGTTTTTCGATTAA
GGAAACTGAGTCGGCGTTGGCCAACACCGGCGCCCACCTTGATCTATCCG
CCTTCTCCAGCTGGGAGGAGCTGGCCTCGCTAGGACTGGATCGTCTAAAG
TCGGCTTTGGTGGCTCTGGGTCTTAAGTGCGGCGGCACCCTGGAGGAGCG
AGCACAGCGTTTATTCTCTACAAAGGTAAAAGCACCTTGGATCCCGCACT
GATGGCCAAGAAGCCCAGCGCAAAGACTGCTAGTGCCAGTCACGGGAGCA
CGACGCCACAAGGAGATTGCCCAGCTAGAGCTCTGCTCTACAAATACGCG
GATCTGTTGTCTGACAGAGAGCGGCTACCAGAGATGTGAAAGAAACAGCT
CGACTGGTGGCGAGCGGACGATAGCGATGTGGAGCAGCGAGTCGACACGA
AATTATTCGACCCGACGAACGTCGTACAATCCAGACTGCGTGATGAACGT
AACCTATCCTACTGTTGTTACGTCGAATGCCTGATTATGCCTATATATGT
C
FMO02129.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| noi-RA | 1859 | CG2925-RA | 127..1228 | 8..1094 | 5140 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5590306..5591333 | 1030..8 | 4890 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:05 has no hits.
FMO02129.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:04 Download gff for
FMO02129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2925-RA | 119..1236 | 1..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:44 Download gff for
FMO02129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 120..1237 | 1..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:41 Download gff for
FMO02129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| noi-RA | 120..1237 | 1..1101 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:41 Download gff for
FMO02129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5590223..5591336 | 1..1101 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:44 Download gff for
FMO02129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1415945..1417058 | 1..1101 | 98 | | Minus |
