FMO02137.5prime Sequence
704 bp (704 high quality bases) assembled on 2008-05-06
> FMO02137.5prime
CAGTCGACATGTCCGACGAGACGAACGCCGCGGTGTGGGATGACTCCTTG
CTGGTGAAGACGTACGACGAGTCGGTGGGACTGGCCCGCGAAGCTTTGGC
CCGCCGCCTCGCCGATTCCACCAACAAGCGCGAGGAGGAGAACGCTGCCG
CAGCTGAAGAAGAAGCTGGCGAGATCTCGGCCACTGGTGGGGCTACCAGC
CCGGAACCAGTATCCTTCAAAGTAGGCGACTACGCCAGGGCCACCTACGT
GGATGGTGTGGACTACGAGGGCGCTGTGGTGTCTATTAACGAGGAGAAGG
GCACCTGCGTACTCCGCTATTTGGGCTATGAGAACGAGCAGGAGGTGTTG
CTCGTGGACCTCCTGCCGTCCTGGGGCAAGCGTGTGCGTCGCGAGCAGTT
CCTTATCGCCAAGAAGGATGAGGACGAGCAGTTGAGCCGCCCTAAGGCAT
CCGCTGGTAGTCATTCAAAGACTCCCAAGTCATCCAGAAGGAGTAGGATC
TCTGGCGGACTGGTTATGCCGCCCATGCCACCAGTACCGCCCATGATTGT
CGGACAAGGGGACGGCGCCGAACAGGACTTCGTGGCCATGCTCACCGCCT
GGTACATGTCCGGCTATTATACGGGCCTCTACCAGGGAAAGAAAGAAGCC
AGCACCACTAGCGGAAAGAAAAAGACACCCAAGAAGGCAAGCTTTCTAGA
CCAT
FMO02137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Smn-RB | 1086 | CG16725-RB | 298..979 | 5..686 | 3395 | 99.9 | Plus |
| Smn-RA | 879 | CG16725-RA | 91..772 | 5..686 | 3395 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16580505..16581186 | 686..5 | 3395 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:20:28 has no hits.
FMO02137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:15 Download gff for
FMO02137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16725-RA | 51..741 | 1..694 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:01 Download gff for
FMO02137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smn-RA | 87..777 | 1..694 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:42 Download gff for
FMO02137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Smn-RA | 87..777 | 1..694 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:42 Download gff for
FMO02137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16580500..16581189 | 1..694 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:01 Download gff for
FMO02137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16573600..16574289 | 1..694 | 98 | | Minus |
