FMO02139.5prime Sequence
1216 bp (947 high quality bases) assembled on 2008-05-06
> FMO02139.5prime
CAGTCGACATGGGAAGAACACTGGAAATAACCGGAAGACAGAATGATAAG
AGTCTGGAGAAGAATCCGGAGCGCTTCACGAAGAATGTGACGGAGAAAGG
CGCCGATCCTGAGAACGGAGACCCGGTGCGCAGGCGCGGCCATGAGACCA
GCGAACTGGAGGCGGCTACGCATCTCTTCAAGGGCAGCGTCGGTGCCGGA
CTCTTCGCCATGGGCGATTGCTTCAAGAACGGCGGATTGGCAGGAGCAAC
CATCCTGCTGCCCATCATTGCGGTGATGTGCGTCCACTGCGAGCGCATGC
TGATCCGTGGTTCCGTGCTGGCCGTGGAGCGCACGCCCGGCGTGGACTTT
CTCGACTATCCGGAAACAGTGGAGAAGTGCTTCGAGCACGGGCCACGCCC
ACTGCGAAAAATGTCGCGCGTAATGAAGCTGATCGTTGAAATGTTCCTCT
GCGTCACGCAGTTTGGCTTCTGCGCCATCTACTTTGTCTTCATCACGGAA
AATCTGCACCAGGTCCTCCAGCAGAACGGCATCGTTATCAGCATGAGCAT
GGTGATGCTGATCACCCTGCTACCGGCGATGATACCCTCGCTGATGACCA
ACCTGAAGTACATCTCGCCCGTGTCGCTGTTTGCCAATGTGGCGCTGCTC
TTCGGCTTGATTGCCACCCTGACCATAGCCTTCTCGGATGGACCCATGCC
GTCCGTTGGCGACAGGCACCTCTTCACTGGCGGAGCTCAGTTGGGCCCTG
TTCTTTGGTACCGCTCTGTTCTCTTACGAGGGCATCGCCCTCATCCTGCC
GCTGCGGAACTCGATGCGCCGACCGGAGAAGTTTAGCACCCGGGTCGGAG
TGCTCAACTCCCACGATGTTCTTGCCACGGCCCTGTTTTATCCTTCACCG
GGATTCGTGAGAGCTTATGTGCGATGGGGGCGAGAGGTAGCCGGCAGCCT
TACCGCCTAAATCTTGTAATGGAGGAAGTTTTTTCGCAGGGGGGGAAAGT
GTGATCCCTGCTTTGGGCGTTTCCTGGGCCTACCCCATCCAGTTCTTTTG
GGATGGATTAAAGATTTTGGGGCCCCCCCTAAAAAGGTCTTAAATAACTG
CACCTCAAAGGTTCCCAATTACCTCGCAGGGGGTGCCCTCCGGTTCTCTT
TATAGGGGAGATAGATAGACTTTGGGCGGTTGGCCCTGTGGTCGCGTTCC
AAGCCTCTCAACCTGG
FMO02139.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4991-RE | 2084 | CG4991-RE | 224..1347 | 5..1147 | 4835 | 96.2 | Plus |
| CG4991-RD | 2012 | CG4991-RD | 152..1275 | 5..1147 | 4835 | 96.2 | Plus |
| CG4991-RF | 2177 | CG4991-RF | 317..1440 | 5..1147 | 4835 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17102435..17103400 | 5..979 | 4245 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:23:28 has no hits.
FMO02139.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:18 Download gff for
FMO02139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4991-RA | 22..1153 | 1..1153 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:31 Download gff for
FMO02139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4991-RF | 313..1444 | 1..1153 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:47 Download gff for
FMO02139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4991-RF | 313..1444 | 1..1153 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:47 Download gff for
FMO02139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17102431..17103400 | 1..979 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:31 Download gff for
FMO02139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16996464..16997433 | 1..979 | 97 | -> | Plus |
