FMO02143.5prime Sequence
443 bp (443 high quality bases) assembled on 2008-05-06
> FMO02143.5prime
CAGTCGACATGGCCGACGTTGATGTTGATGTTCCCTCCGCTGCCCCTGTG
CTCGATGGCGCCATGGACATTAACACTGCCCTCCAGGAGGTCTTGAAGAA
GTCCCTGATCGCCGATGGACTCGTCCATGGCATCCACCAGGCCTGCAAGG
CCCTGGACAAGCGTCAGGCTGTTCTGTGCATCCTAGCCGAGTCCTTCGAC
GAGCCCAACTACAAGAAGCTGGTTACCGCCCTGTGCAACGAGCACCAGAT
CCCCCTTATCCGCGTGGACTCGCACAAGAAGCTGGGCGAATGGTCCGGTC
TGTGCAAGATCGACAAGGAGGGCAAGCCCCGCAAGGTGTGCGGCTGCTCC
GTGGTCGTGATCAAGGATTTCGGTGAGGAGACACCCGCTTTGGACGTGGT
TAAGGACCATCTCAGGCAGAACAGCGCAAGCTTTCTAGACCAT
FMO02143.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS12-RB | 613 | CG11271-RB | 69..485 | 9..425 | 2085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 13024366..13024634 | 157..425 | 1330 | 99.6 | Plus |
3L | 28110227 | 3L | 13023732..13023867 | 26..161 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:20:32 has no hits.
FMO02143.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:22 Download gff for
FMO02143.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11271-RC | 45..471 | 1..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:04 Download gff for
FMO02143.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS12-RB | 62..488 | 1..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:45 Download gff for
FMO02143.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS12-RB | 62..488 | 1..429 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:45 Download gff for
FMO02143.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 13023732..13023866 | 26..160 | 100 | -> | Plus |
3L | 13024370..13024637 | 161..429 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:04 Download gff for
FMO02143.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 13017470..13017737 | 161..429 | 99 | | Plus |
arm_3L | 13016832..13016966 | 26..160 | 100 | -> | Plus |