FMO02149.5prime Sequence
1196 bp (1030 high quality bases) assembled on 2008-05-06
> FMO02149.5prime
CAGTCGACATGCATCCCGATCTCACGGAGCGCATTCTCCAGCATTTGGAG
ACCACCGACAAGGCGGACACACTGGACCTGGCCGCACTCTTTGCCGAGGA
TCACCAGAAGATTGTGGGCTCATTGAAGAGCATACAGGCGCATGGCGAAC
TAGTCACCGCGGAAACGGTCACCCACAAGAGTTTGGGCCTCACAGACGAG
GGTCGCGCCGTCGTGGAGAATGGCAGTCATGAGGCACTGGTCTACGACCT
AGTTCCGCCGGAGGGAATCGCCCAGGCGGCTCTAATGGCAGCCGGTGGCG
CAAATGCCAAAGTGGGCTTTAGCAAAGCCATGTCGCACGGCTGGATTTTG
GTGGACAAGAGCGTCACGCCGCCGCTGGTGCGCCGCAAGGTGGACACCAT
TACGGATGTGGTGCGCAATCAACTGCAGCAGGTGGCGCTGGGAAAGGGTG
ACCAGCTGCCTGCCAAGGAGGTGGCCGACTTCAAGAAACGCAAGCTCCTC
CAGGAAACGACCACCAAGAGCTTCGTGCTGGCACGCGGCCCTGAATTTGC
CACCACTCTCACCAAGTTGGAGACGGATCTCACGGTGGAAATGCTCGCAA
ATGGATTGTGGGACCAGCTCAAGTTCAAGGCCTATAACTTTGATGCGTTG
GGTGCACCACCAACGCGTGGACATCTCCATCCCTTGCTCAAAGTGCGCAC
TGAGTTCCGGCAGATATTCCTCGAGATGGGCTTCTCAGAGATGCCTACGA
ACAACTATGTGGAATCGTCATTCTGGAACTTCGATGCGCTCTATCAGCCG
CAACAGCATCCAGCTCGCGATGCCCACGACACCTTCTTCGTGAATCATCC
GGCCAAAGCCACAAGTTTCCGCAGGACTATCTGGAGCGCGTGAAGAAGTG
CACTCTGTGGGTGGCTATGGATCGAAGGGTTACGGCTACGACTGGAGCTG
GAGGAGCGCAAAGATCTACTGCGCACGCATACGACGGCGTGAGTGCGAGA
TGCTGTCAAGCTGGCCACCAGAGGGCGGCTTCAAGCAGCAGTACTCAGCA
TCGACAGTGTTCCGCACGACACTGGACGCCCACACATCTGGCGGATCATC
AGTGGAGGGCGGTGATGCCAGTGCTGAACCTTGCGAATCCATGCACGCTG
TACGAGTTCTCGAAGGGCAGTGCGTGGGCGCATATCATGGCATACG
FMO02149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2263-RA | 1699 | CG2263-RA | 108..1233 | 9..1111 | 5050 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8144498..8145495 | 999..9 | 4650 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:16:53 has no hits.
FMO02149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:29 Download gff for
FMO02149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2263-RA | 102..1236 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:02 Download gff for
FMO02149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2263-RA | 103..1237 | 1..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:02 Download gff for
FMO02149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2263-RA | 103..1237 | 1..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:02 Download gff for
FMO02149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8144366..8145500 | 1..1116 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:02 Download gff for
FMO02149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8038399..8039533 | 1..1116 | 97 | | Minus |
