FMO02152.5prime Sequence
1232 bp (1034 high quality bases) assembled on 2008-05-06
> FMO02152.5prime
CAGTCGACATGAACGAGAAAATCGTGCGGGAGCAGCGCGGCGGCGAAGAT
TCCCCATCCTCCGTCTCGGCGAAAAGTGCAACGGCAGCGGCGTCAGCGTC
GACAGCGTCGATGACGTTTGCCTCGGCGGCCTTGGAATCGCACAAGACGA
CCACCATCACGACCGCCAGCAGCAGCCCTCGCACCAGTGGAGCAAGTGCA
TCCGCCTCGTCATCCTCTCGATCCGCATCTGCACCTGCATCGTCGTCCAG
CCAGCAGGAAAAGCAACCGATGCTGAATGCCACCGATATGCGCGAACTGC
GCGAAATCAAGCAGTTGCTGTGGGGCGACAATGTGCGCGAAGATGTATTC
AAGCGTTGGTCTCAAGGATTCGAGTTTAGTAAAGTGGAACCGTCTGCATT
GGTGCAGAAGCAGGGCGGTCCTTGTGCTGTGATAGCGCCGGTGCAGGCGT
ACTTGCTTAAGATTATTATCATGGACTTGCCAGGCATCAAGCTCTCGGAG
ATTTCCCTCGACAAATCGCAGAACCTGCTGATCCAGGCATTGTGTGACAT
CCTGAAGAATTGTCGGGCGCCGCGGTACCGCATCGTCCATCTCTTGCGCC
GACGAGGAAACGCTACAGAGGCTGGATCAACCAAAAAGCGCTCACCGGCT
GGCGAGGAAGAATCTGCTTTAGCTGGCCAAGCGGCAGGATCTTCCGAAGA
GGTGGAGGAGGCGGCAGAAGCCACTCCCGCCTCGGTCAGCAAGTTGTCCC
AGGCCCTGCAGCTCGAACACGATATGCACCAGGAACTGTCGCCGGATGAG
TTCCACGAGCGCCTGCACACGCTCCACTTTAAGAATATCGCAGCCGTGGC
CCGCTACTATATGGAGAATTACGACCAGCTGGCGCACACATACGGCGTGC
TGCTGTTCATGTACTCGGTGTTCCTCACAAGGGCTTGAGCTGGTTGCGCC
GATTTTATCGGACACGTCGGAGCCCTGATACACAGCACATACGGCTTATG
GCGGCCAGTCGCTTATTAACCTGATGCTAACTGGGCGAGCAGTTGCCCAT
GTCTGGGATATGAACAGACGTTGGCCGACTGAAGCTGCTGCCATCTTGTG
AACAAGCGAAATCGCTTTATAAACCTGATGAAGAATGCGTTACTGACCGG
TGGTCTTCTCGAACCACGCCTTCCGGTATGGTGATGAGGTCCGAATCTCG
CAATTCAACCGGTTCGCGTGCTGCACGCACCG
FMO02152.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7332-RB | 3401 | CG7332-RB | 305..1506 | 9..1194 | 5280 | 96.9 | Plus |
| CG7332-RA | 2146 | CG7332-RA | 305..1506 | 9..1194 | 5280 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18886018..18886611 | 499..1088 | 2570 | 97.8 | Plus |
| X | 23542271 | X | 18884817..18885175 | 9..367 | 1795 | 100 | Plus |
| X | 23542271 | X | 18885827..18885962 | 365..500 | 680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:08:01 has no hits.
FMO02152.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-05-23 18:07:34 Download gff for
FMO02152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7332-RA | 308..1474 | 1..1159 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:57 Download gff for
FMO02152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7332-RA | 297..1463 | 1..1159 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:03 Download gff for
FMO02152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7332-RA | 297..1463 | 1..1159 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:03 Download gff for
FMO02152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18884809..18885174 | 1..366 | 99 | -> | Plus |
| X | 18885829..18885962 | 367..500 | 100 | -> | Plus |
| X | 18886020..18886658 | 501..1133 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:57 Download gff for
FMO02152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18778842..18779207 | 1..366 | 99 | -> | Plus |
| arm_X | 18779862..18779995 | 367..500 | 100 | -> | Plus |
| arm_X | 18780053..18780691 | 501..1133 | 96 | -> | Plus |
